Detailed information    

insolico Bioinformatically predicted

Overview


Name   tsaP   Type   Machinery gene
Locus tag   L2Z14_RS00730 Genome accession   NZ_CP091360
Coordinates   148661..149815 (+) Length   384 a.a.
NCBI ID   WP_020752706.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AB179-VUB     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 143661..154815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L2Z14_RS00705 (L2Z14_00705) - 143813..145027 (+) 1215 WP_001177954.1 oxygenase MpaB family protein -
  L2Z14_RS00710 (L2Z14_00710) - 145097..145303 (-) 207 WP_000182542.1 hypothetical protein -
  L2Z14_RS00715 (L2Z14_00715) - 145357..147471 (-) 2115 WP_226200313.1 TonB-dependent copper receptor -
  L2Z14_RS00720 (L2Z14_00720) - 147543..147971 (-) 429 WP_000231986.1 DUF2946 family protein -
  L2Z14_RS00725 (L2Z14_00725) def 148008..148538 (-) 531 WP_001196539.1 peptide deformylase -
  L2Z14_RS00730 (L2Z14_00730) tsaP 148661..149815 (+) 1155 WP_020752706.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  L2Z14_RS00735 (L2Z14_00735) dprA 149836..150966 (+) 1131 WP_031945334.1 DNA-processing protein DprA Machinery gene
  L2Z14_RS00740 (L2Z14_00740) - 151017..151586 (+) 570 WP_000633612.1 Sua5/YciO/YrdC/YwlC family protein -
  L2Z14_RS00745 (L2Z14_00745) - 151977..152897 (-) 921 WP_000084546.1 DMT family transporter -
  L2Z14_RS00750 (L2Z14_00750) - 153003..153653 (-) 651 WP_086225940.1 TetR/AcrR family transcriptional regulator -

Sequence


Protein


Download         Length: 384 a.a.        Molecular weight: 42339.29 Da        Isoelectric Point: 8.5816

>NTDB_id=650295 L2Z14_RS00730 WP_020752706.1 148661..149815(+) (tsaP) [Acinetobacter baumannii strain AB179-VUB]
MKKVFNGMVNFHALGIKKHLLALALCTGVAIGTIAEVHATSPNHNPPSLKSNAPNVYVVKRGDTLWDISGHFLNKPWRWP
EIWASNQHVKNPHWIYPGDRLLLCSLDGRPLVGKDEGDGCVGIIRRYTGQTTNLQPQVRVEALNNSVPVIPLEHIKQWLE
SSTILPADSITNTPYIVGTADQRVLAGKGQTIYARGQGLINGQRYAVYREGEPYYFTDNKGKKHSLGIELLQVASGVAVS
SEKDITTLELTDSYNAEVRRGDRVMLEEQATLPTLFYPVDAKQVTDGGKIIRVMGSIGRAAKNSVVTLDRGTTQGIQVGQ
VFDITQQGESIRDPKTKEVIQLPGQQIGSLMVFRTFDQLSYAYVLESDLPIKVGSSIQPPQFND

Nucleotide


Download         Length: 1155 bp        

>NTDB_id=650295 L2Z14_RS00730 WP_020752706.1 148661..149815(+) (tsaP) [Acinetobacter baumannii strain AB179-VUB]
ATGAAAAAGGTTTTTAACGGCATGGTTAATTTTCATGCCTTGGGGATAAAGAAGCATTTACTTGCTTTGGCGCTCTGTAC
AGGTGTCGCAATCGGTACGATAGCAGAGGTTCATGCAACCAGTCCGAACCATAATCCACCCTCCCTTAAAAGTAATGCAC
CCAATGTATATGTTGTAAAACGTGGGGATACTTTATGGGATATTTCAGGACATTTTCTAAATAAACCATGGCGTTGGCCT
GAAATCTGGGCGAGCAACCAACATGTTAAAAATCCACACTGGATCTATCCGGGTGACCGATTACTATTATGTAGCCTAGA
TGGGCGTCCTTTAGTCGGTAAAGATGAGGGCGATGGTTGTGTCGGTATTATTCGCCGCTATACAGGTCAAACCACAAACC
TACAACCACAAGTTCGCGTCGAAGCATTAAATAATAGCGTTCCGGTTATTCCACTTGAACATATTAAACAGTGGTTAGAG
AGCAGTACTATTTTACCAGCCGACTCAATTACCAACACACCTTATATTGTTGGTACAGCCGATCAACGTGTACTTGCAGG
AAAAGGCCAGACTATTTATGCACGAGGACAAGGCTTAATTAATGGGCAGCGTTATGCAGTCTACCGAGAAGGTGAACCTT
ACTATTTCACAGACAATAAAGGTAAAAAGCATAGTTTAGGGATTGAGTTACTACAGGTTGCTTCAGGTGTTGCGGTATCT
TCTGAAAAAGATATTACTACATTAGAACTAACAGATAGTTATAACGCTGAAGTACGTCGTGGTGATCGTGTTATGCTTGA
AGAGCAAGCTACTTTGCCAACATTATTTTACCCAGTAGATGCGAAGCAAGTGACGGATGGTGGCAAGATTATTCGTGTCA
TGGGCTCAATTGGTAGAGCTGCAAAAAATAGTGTAGTGACTTTGGATCGCGGTACAACTCAGGGCATTCAAGTAGGTCAA
GTTTTTGATATTACTCAACAAGGTGAATCAATTCGCGACCCTAAAACTAAAGAAGTAATTCAACTTCCTGGCCAACAAAT
TGGCAGTCTAATGGTTTTTAGAACTTTTGATCAGCTAAGTTATGCTTATGTTTTAGAGAGCGATTTACCAATTAAAGTTG
GTTCAAGCATTCAGCCACCTCAATTTAATGATTAA

Domains


Predicted by InterproScan.

(57-102)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tsaP Acinetobacter baumannii D1279779

98.958

100

0.99