Detailed information NTG0650267

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z16_RS08585
• Genome accession: NZ_CP091359
• Coordinates: 1765274..1765975 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB180-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1760274..1770975

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z16_RS08550 (L2Z16_08550)	kdsB	1760797..1761558 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z16_RS08555 (L2Z16_08555)	-	1761570..1762550 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z16_RS08560 (L2Z16_08560)	-	1762562..1762903 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z16_RS08565 (L2Z16_08565)	-	1762921..1763694 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z16_RS08570 (L2Z16_08570)	-	1763732..1764340 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z16_RS08575 (L2Z16_08575)	-	1764350..1764904 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z16_RS08580 (L2Z16_08580)	xcpV	1764894..1765274 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z16_RS08585 (L2Z16_08585)	xcpW	1765274..1765975 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z16_RS08590 (L2Z16_08590)	gspK	1765975..1766934 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z16_RS08595 (L2Z16_08595)	-	1767165..1767761 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z16_RS08600 (L2Z16_08600)	ung	1767812..1768525 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z16_RS08605 (L2Z16_08605)	-	1768522..1769646 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z16_RS08610 (L2Z16_08610)	tadA	1769653..1770156 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z16_RS08615 (L2Z16_08615)	-	1770226..1770669 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650267 L2Z16_RS08585 WP_000594589.1 1765274..1765975(+) (xcpW) [Acinetobacter baumannii strain AB180-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650267 L2Z16_RS08585 WP_000594589.1 1765274..1765975(+) (xcpW) [Acinetobacter baumannii strain AB180-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996