Detailed information NTG0650264

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG842_RS26125
• Genome accession: NZ_CP107960
• Coordinates: 5809790..5811088 (+)
• Length: 432 a.a.
• NCBI ID: WP_072483632.1
• Uniprot ID: A0A1K1UXB1
• Organism: Streptomyces sp. NBC_00376
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5804790..5816088

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG842_RS26095 (OG842_26085)	-	5805758..5805952 (+)	195	WP_266733056.1	hypothetical protein	-
OG842_RS26110 (OG842_26100)	tig	5806586..5808004 (+)	1419	WP_266733057.1	trigger factor	-
OG842_RS26115 (OG842_26105)	-	5808270..5808875 (+)	606	WP_187438547.1	ATP-dependent Clp protease proteolytic subunit	-
OG842_RS26120 (OG842_26110)	clpP	5808952..5809632 (+)	681	WP_323185784.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG842_RS26125 (OG842_26115)	clpX	5809790..5811088 (+)	1299	WP_072483632.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG842_RS26130 (OG842_26120)	-	5811150..5812199 (-)	1050	WP_266733061.1	hypothetical protein	-
OG842_RS26135 (OG842_26125)	-	5812340..5814961 (+)	2622	WP_266733062.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47229.03 Da
• Isoelectric Point: 4.8824

>NTDB_id=650264 OG842_RS26125 WP_072483632.1 5809790..5811088(+) (clpX) [Streptomyces sp. NBC_00376]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=650264 OG842_RS26125 WP_072483632.1 5809790..5811088(+) (clpX) [Streptomyces sp. NBC_00376]
GTGGCACGCATCGGTGATGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGTAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTCCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGGCGGCGCGCAGGGCCG
CGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGACGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGCGGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGTTCGAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGAATGATCCCGGAGTTCATCGGCCGGCTGCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGACCGCCCGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGAGCGCGTGGCCTGC
GGGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCCGACGTCGTCCGCAACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGGCGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

3D structure

• AlphaFold DB: A0A1K1UXB1

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509