Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG842_RS22090 Genome accession   NZ_CP107960
Coordinates   4881468..4882592 (-) Length   374 a.a.
NCBI ID   WP_266731937.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00376     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4876468..4887592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG842_RS22065 (OG842_22045) - 4877161..4877808 (-) 648 WP_266733742.1 hypothetical protein -
  OG842_RS22070 (OG842_22050) - 4877886..4878500 (-) 615 WP_266731931.1 SigE family RNA polymerase sigma factor -
  OG842_RS22075 (OG842_22055) - 4878677..4879579 (-) 903 WP_266731933.1 A/G-specific adenine glycosylase -
  OG842_RS22080 (OG842_22060) - 4879735..4880382 (-) 648 WP_328512445.1 phosphatase PAP2 family protein -
  OG842_RS22085 (OG842_22065) - 4880567..4881379 (+) 813 WP_266731935.1 hypothetical protein -
  OG842_RS22090 (OG842_22070) disA 4881468..4882592 (-) 1125 WP_266731937.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG842_RS22095 (OG842_22075) radA/sms 4882673..4884085 (-) 1413 WP_266731938.1 DNA repair protein RadA Machinery gene
  OG842_RS22100 (OG842_22080) - 4884303..4886183 (+) 1881 WP_266731940.1 hypothetical protein -
  OG842_RS22105 (OG842_22085) - 4886255..4887115 (-) 861 WP_266731942.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40350.26 Da        Isoelectric Point: 4.9372

>NTDB_id=650255 OG842_RS22090 WP_266731937.1 4881468..4882592(-) (disA) [Streptomyces sp. NBC_00376]
MAANDRAASPGKSGQGTGNEALMRASLSAVAPGMALRDGLERILRGNTGGLIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDALSHTELLELAVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=650255 OG842_RS22090 WP_266731937.1 4881468..4882592(-) (disA) [Streptomyces sp. NBC_00376]
GTGGCAGCCAACGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAGGCACCGGTAATGAGGCGCTCATGCGCGCCTCGCT
GAGCGCCGTGGCGCCCGGAATGGCGCTGCGGGACGGACTGGAGCGCATCCTCCGCGGCAACACCGGCGGACTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACGCGCCTGCGC
GAGCTGGCCAAGCTCGACGGCGCGCTGATCCTCGACAAGGACATGACCAAGATCCTGCGCGCCGGCGTGCAGCTGGTGCC
GGACGCCTCCATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTTTCGCAGTCGATGCGCCTGATCGCGCTCTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCCGCCGCG
ATCCTCTCCCGCGCCAATCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTCCGGCTCGACGAGGTCGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCCGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CGACCGAGATCGCGGAGTACGTGGTCGAGCTCGGAACCGACGGCCGGCTCCTCTCGCTCCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTCGTGCGCGACTATGTGCCGGAGCCGACCGCGAAGCGGTCCCGCACGGTCGCCGA
GGCGCTGACGGAGCTCGACGCGCTCTCCCACACCGAGCTGCTCGAACTCGCGGTCGTGGCGCGGGCCCTGGGCTACAGCG
GCTCGCCCGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGCTTCCGACTGCTGGCGAAGGTTCCCCGGCTGCCCGGGGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCCGCCAGCGTGGACGATCTCCAGACGGTGGA
CGGCGTCGGTGAGGCGCGGGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCCGAGTCGTCGATCCTCGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436