Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | L2Z17_RS09265 | Genome accession | NZ_CP091358 |
| Coordinates | 1928279..1928659 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AB181-VUB | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1923279..1933659
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z17_RS09235 (L2Z17_09230) | kdsB | 1924182..1924943 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| L2Z17_RS09240 (L2Z17_09235) | - | 1924955..1925935 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| L2Z17_RS09245 (L2Z17_09240) | - | 1925947..1926288 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| L2Z17_RS09250 (L2Z17_09245) | - | 1926306..1927079 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| L2Z17_RS09255 (L2Z17_09250) | - | 1927117..1927725 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| L2Z17_RS09260 (L2Z17_09255) | - | 1927735..1928289 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| L2Z17_RS09265 (L2Z17_09260) | xcpV | 1928279..1928659 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| L2Z17_RS09270 (L2Z17_09265) | xcpW | 1928659..1929360 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| L2Z17_RS09275 (L2Z17_09270) | gspK | 1929360..1930319 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| L2Z17_RS09280 (L2Z17_09275) | - | 1930550..1931146 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| L2Z17_RS09285 (L2Z17_09280) | ung | 1931197..1931910 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| L2Z17_RS09290 (L2Z17_09285) | - | 1931907..1933031 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| L2Z17_RS09295 (L2Z17_09290) | tadA | 1933038..1933541 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=650223 L2Z17_RS09265 WP_000836911.1 1928279..1928659(+) (xcpV) [Acinetobacter baumannii strain AB181-VUB]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=650223 L2Z17_RS09265 WP_000836911.1 1928279..1928659(+) (xcpV) [Acinetobacter baumannii strain AB181-VUB]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |