Detailed information NTG0650224

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: L2Z17_RS09270
• Genome accession: NZ_CP091358
• Coordinates: 1928659..1929360 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AB181-VUB
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1923659..1934360

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L2Z17_RS09235 (L2Z17_09230)	kdsB	1924182..1924943 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
L2Z17_RS09240 (L2Z17_09235)	-	1924955..1925935 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
L2Z17_RS09245 (L2Z17_09240)	-	1925947..1926288 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
L2Z17_RS09250 (L2Z17_09245)	-	1926306..1927079 (+)	774	WP_000497298.1	TatD family hydrolase	-
L2Z17_RS09255 (L2Z17_09250)	-	1927117..1927725 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
L2Z17_RS09260 (L2Z17_09255)	-	1927735..1928289 (+)	555	WP_000841373.1	type II secretion system protein	-
L2Z17_RS09265 (L2Z17_09260)	xcpV	1928279..1928659 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
L2Z17_RS09270 (L2Z17_09265)	xcpW	1928659..1929360 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
L2Z17_RS09275 (L2Z17_09270)	gspK	1929360..1930319 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
L2Z17_RS09280 (L2Z17_09275)	-	1930550..1931146 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
L2Z17_RS09285 (L2Z17_09280)	ung	1931197..1931910 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
L2Z17_RS09290 (L2Z17_09285)	-	1931907..1933031 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
L2Z17_RS09295 (L2Z17_09290)	tadA	1933038..1933541 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
L2Z17_RS09300 (L2Z17_09295)	-	1933611..1934054 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=650224 L2Z17_RS09270 WP_000594589.1 1928659..1929360(+) (xcpW) [Acinetobacter baumannii strain AB181-VUB]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=650224 L2Z17_RS09270 WP_000594589.1 1928659..1929360(+) (xcpW) [Acinetobacter baumannii strain AB181-VUB]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996