Detailed information NTG0065010

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7Q99_RS22740
• Genome accession: NZ_AP021998
• Coordinates: 4727703..4728728 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP3-W18-ESBL-07
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4722703..4733728

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7Q99_RS22720 (WP3W18E07_43980)	metJ	4723888..4724205 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
H7Q99_RS22725 (WP3W18E07_43990)	yiiX	4724265..4724873 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
H7Q99_RS22730 (WP3W18E07_44000)	rpmE	4724934..4725146 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7Q99_RS22735 (WP3W18E07_44010)	priA	4725349..4727547 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
H7Q99_RS22740 (WP3W18E07_44020)	cytR	4727703..4728728 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7Q99_RS22745 (WP3W18E07_44030)	ftsN	4728820..4729779 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7Q99_RS22750 (WP3W18E07_44040)	hslV	4729872..4730402 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7Q99_RS22755 (WP3W18E07_44050)	hslU	4730412..4731743 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7Q99_RS22760 (WP3W18E07_44060)	menA	4731810..4732736 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7Q99_RS22765 (WP3W18E07_44070)	rraA	4732829..4733314 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7Q99_RS22770 (WP3W18E07_44080)	zapB	4733399..4733644 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=65010 H7Q99_RS22740 WP_000644908.1 4727703..4728728(+) (cytR) [Escherichia coli strain WP3-W18-ESBL-07]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=65010 H7Q99_RS22740 WP_000644908.1 4727703..4728728(+) (cytR) [Escherichia coli strain WP3-W18-ESBL-07]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625