Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG917_RS19675 Genome accession   NZ_CP107948
Coordinates   4384841..4385992 (-) Length   383 a.a.
NCBI ID   WP_328318926.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00388     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4379841..4390992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG917_RS19645 (OG917_19665) cseB 4379934..4380632 (-) 699 WP_328318921.1 two-component system response regulator CseB -
  OG917_RS19650 (OG917_19670) - 4380645..4381379 (-) 735 WP_328318922.1 hypothetical protein -
  OG917_RS19655 (OG917_19675) - 4381367..4381918 (-) 552 WP_328318923.1 SigE family RNA polymerase sigma factor -
  OG917_RS19660 (OG917_19680) - 4382096..4383061 (-) 966 WP_328318924.1 A/G-specific adenine glycosylase -
  OG917_RS19665 (OG917_19685) - 4383078..4383686 (-) 609 WP_328318925.1 phosphatase PAP2 family protein -
  OG917_RS19670 (OG917_19690) - 4383869..4384708 (+) 840 WP_328322023.1 hypothetical protein -
  OG917_RS19675 (OG917_19695) disA 4384841..4385992 (-) 1152 WP_328318926.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG917_RS19680 (OG917_19700) radA/sms 4386049..4387446 (-) 1398 WP_328318927.1 DNA repair protein RadA Machinery gene
  OG917_RS19685 (OG917_19705) - 4387699..4389399 (+) 1701 WP_328318928.1 hypothetical protein -
  OG917_RS19690 (OG917_19710) - 4389554..4390354 (-) 801 WP_328318929.1 hypothetical protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41122.06 Da        Isoelectric Point: 5.1127

>NTDB_id=649940 OG917_RS19675 WP_328318926.1 4384841..4385992(-) (disA) [Streptomyces sp. NBC_00388]
MAANDRAAAGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTSPRAASGRGPQRPRTVADALVELNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLL
AKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=649940 OG917_RS19675 WP_328318926.1 4384841..4385992(-) (disA) [Streptomyces sp. NBC_00388]
GTGGCAGCCAATGACCGAGCAGCAGCCGGGAGGTCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCCGTGGCGCCCGGAACCGCACTCCGCGACGGCCTGGAGCGCATCCTCCGGGGGAACACCGGCGGCCTGATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACGGGCGGCTTCGTCATGGACGTCGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAACTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGCGTCCAGCTCGTGCC
CGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACAGCCGACCGGGTCTCCAAGCAGTGCGGCTTCCCGG
TCGTCTCCGTATCGCAGTCGATGCATCTGATCGCGCTGTACGTGGACGGGGAACGCCGGGTCCTGGAGGAGTCGGCTGCG
ATCCTGTCCCGCGCCAACCAGGCTCTGGCCACGCTGGAGCGGTACAAGCTGCGTCTTGACGAGGTGGCGGGCACGCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTGACGGCGGTCGCGCAGCGGCTGGAGATGGTCCGCCGGATCG
CCACCGAGATCGCCGAGTACGTCGTGGAGCTGGGCACGGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCC
GGGGTCGAGCCGGAGCGCGAGCTGGTCGTCAGGGACTACGTGCCGGAGCCGACCTCCCCCAGGGCGGCCTCCGGGAGGGG
CCCGCAGCGTCCCCGTACGGTCGCGGACGCACTGGTCGAGCTGAACACGCTCAGCCACACCGAGCTGCTCGAACTGCCTG
TGGTGGCCAGGGCACTGGGGTACAGCGGCTCCCCCGAGACGCTCGACTCCGCGGTGTCGCCGCGCGGATACCGGCTGCTG
GCGAAGGTGCCGAGGCTGCCCGGAGCGATCATCGAGCGGCTCGTCGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCGGC
GAGCGTGGACGATCTCCAGACGGTGGACGGCGTCGGCGAGGCCCGGGCGCGGAGTGTGCGGGAGGGGCTCTCCCGGCTCG
CGGAGTCCTCGATTCTGGAGCGTTACGTATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.455

94.778

0.431