Detailed information NTG0649903

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG917_RS03225
• Genome accession: NZ_CP107948
• Coordinates: 704199..705473 (-)
• Length: 424 a.a.
• NCBI ID: WP_328315973.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00388
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 699199..710473

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG917_RS03205 (OG917_03210)	asnB	699589..701787 (+)	2199	WP_328315969.1	asparagine synthase (glutamine-hydrolyzing)	-
OG917_RS03210 (OG917_03215)	-	701841..702626 (+)	786	WP_328315970.1	nucleotidyltransferase domain-containing protein	-
OG917_RS03215 (OG917_03220)	-	702623..702910 (+)	288	WP_328315971.1	PqqD family protein	-
OG917_RS03220 (OG917_03225)	-	703032..704111 (+)	1080	WP_328315972.1	diiron oxygenase	-
OG917_RS03225 (OG917_03230)	clpX	704199..705473 (-)	1275	WP_328315973.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG917_RS03230 (OG917_03235)	eno	705659..706942 (+)	1284	WP_328315974.1	phosphopyruvate hydratase	-
OG917_RS03235 (OG917_03240)	-	707061..708152 (+)	1092	WP_328315975.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	-
OG917_RS03240 (OG917_03245)	-	708188..708508 (-)	321	WP_328315976.1	HPr family phosphocarrier protein	-
OG917_RS03245 (OG917_03250)	-	708746..709522 (+)	777	WP_328315977.1	IclR family transcriptional regulator	-

Sequence

Protein

• Length: 424 a.a.
• Molecular weight: 45557.10 Da
• Isoelectric Point: 4.8941

>NTDB_id=649903 OG917_RS03225 WP_328315973.1 704199..705473(-) (clpX) [Streptomyces sp. NBC_00388]
MTVVGPGAAQLTCSFCDKRQDEVLKIVSGPGIHICDGCVDLCAEVVADEKRSQSMTRLGGLPKPREIRAFLDTYVVGQDR
AKRSLSVAVYNHYKRVRADEPGDDEVELAKSNILLLGPTGSGKTLLTQTLARILDVPFAIADATGLTEAGYVGEDVDGLL
LKLIQAADFDVKKAETGIVYIDEIDKIARRGDGPAVSRDVSGEGVQQSLLKVLEGSVVTVTPQNRGTGAVQGSRSRTAQE
GLQIDTSHILFIVGGAFAGLEKIIEKRTRAKGIGFGGQVRSRQEEAAGDLFDAVTPEDLVKFGMIPELIGRLPMITSVAQ
LDREALLRILTEPKNALVRQYRKLFQLDGVELAFEPAALEAVADQAISRGTGARGLRSILDEALISVMYDVPSLEDVVRV
TVTEETVLHGAEPLLGRSEAQVRT

Nucleotide

• Length: 1275 bp

>NTDB_id=649903 OG917_RS03225 WP_328315973.1 704199..705473(-) (clpX) [Streptomyces sp. NBC_00388]
ATGACCGTTGTCGGCCCCGGCGCAGCCCAACTCACCTGCTCCTTCTGCGACAAGAGACAAGACGAAGTCTTGAAGATTGT
CTCGGGTCCCGGTATCCATATCTGCGACGGATGCGTCGACCTCTGTGCGGAAGTGGTGGCCGACGAAAAGAGGTCGCAGT
CAATGACCCGGCTCGGCGGACTCCCGAAGCCACGTGAGATACGGGCATTTCTGGACACTTATGTCGTGGGTCAGGACCGC
GCAAAGAGGTCGCTGTCCGTGGCTGTCTACAACCATTACAAGCGGGTGCGTGCCGACGAGCCGGGCGACGACGAAGTGGA
ACTGGCGAAGTCCAACATCCTGTTGCTGGGGCCCACCGGCTCCGGGAAGACGTTGCTCACCCAGACGCTGGCCAGGATCC
TCGACGTCCCCTTCGCCATCGCCGACGCAACCGGACTGACCGAGGCCGGCTACGTGGGGGAGGACGTCGACGGGCTGCTG
CTGAAGCTGATCCAGGCGGCGGACTTCGATGTGAAGAAGGCCGAGACGGGGATCGTCTACATCGACGAGATCGACAAGAT
CGCCCGCCGGGGGGACGGCCCCGCTGTCTCACGTGATGTGTCCGGCGAAGGGGTCCAGCAATCGCTGCTGAAGGTACTCG
AAGGCTCGGTCGTCACGGTCACACCGCAGAACCGGGGCACCGGAGCCGTCCAGGGGAGCCGCAGCCGTACAGCCCAGGAG
GGTCTGCAGATCGACACCTCCCACATCCTGTTCATCGTCGGCGGTGCGTTCGCCGGCCTGGAGAAGATCATCGAGAAGCG
CACCCGGGCCAAGGGCATCGGCTTCGGCGGTCAGGTGCGCTCCCGGCAGGAGGAGGCGGCGGGCGACCTCTTCGATGCCG
TCACCCCGGAGGATCTGGTGAAGTTCGGGATGATCCCCGAGCTGATCGGCCGGCTGCCCATGATCACCTCGGTCGCCCAG
CTGGACCGGGAGGCGCTGCTGCGCATTCTCACCGAGCCGAAGAACGCCCTGGTCCGCCAGTACCGGAAGCTGTTCCAGCT
GGACGGGGTGGAGCTGGCCTTCGAACCCGCGGCACTTGAGGCAGTGGCCGACCAGGCGATCAGCCGGGGCACCGGCGCCC
GGGGGCTGCGGTCCATCCTGGACGAGGCACTGATCTCGGTGATGTACGACGTGCCGTCGCTGGAGGACGTGGTGCGGGTG
ACCGTGACCGAGGAGACCGTGCTGCACGGGGCCGAGCCGCTGCTGGGCCGGAGCGAGGCGCAGGTCAGGACCTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-315)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-47)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (321-397)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	54.95	95.283	0.524
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	50.488	96.698	0.488