Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS70_RS16110 Genome accession   NZ_CP107945
Coordinates   3742035..3743186 (+) Length   383 a.a.
NCBI ID   WP_328398041.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00390     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3737035..3748186
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS70_RS16090 (OHS70_16110) - 3737165..3737995 (+) 831 WP_328398033.1 hypothetical protein -
  OHS70_RS16095 (OHS70_16115) - 3738023..3739711 (-) 1689 WP_328398035.1 hypothetical protein -
  OHS70_RS16100 (OHS70_16120) - 3739908..3740489 (+) 582 WP_328398037.1 dihydrofolate reductase family protein -
  OHS70_RS16105 (OHS70_16125) radA/sms 3740547..3741989 (+) 1443 WP_328398039.1 DNA repair protein RadA Machinery gene
  OHS70_RS16110 (OHS70_16130) disA 3742035..3743186 (+) 1152 WP_328398041.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS70_RS16115 (OHS70_16135) - 3743250..3744047 (-) 798 WP_328398043.1 hypothetical protein -
  OHS70_RS16120 (OHS70_16140) - 3744346..3745260 (+) 915 WP_328398045.1 A/G-specific adenine glycosylase -
  OHS70_RS16125 (OHS70_16145) - 3745432..3745998 (+) 567 WP_328398047.1 SigE family RNA polymerase sigma factor -
  OHS70_RS16130 (OHS70_16150) - 3745986..3746663 (+) 678 WP_328398049.1 hypothetical protein -
  OHS70_RS16135 (OHS70_16155) cseB 3746674..3747378 (+) 705 WP_328398051.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 41028.90 Da        Isoelectric Point: 5.1207

>NTDB_id=649855 OHS70_RS16110 WP_328398041.1 3742035..3743186(+) (disA) [Streptomyces sp. NBC_00390]
MAAKDGATAPGKSGSGTGNEALIRAALSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVESMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDISKIHRAGVQLVPDASIPTEETGTRHRTADRVSRQCGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVGAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERDLVVRDYVPEPTSPRAVPGRGPQRSRTVDEALAELDALTHTELLELPVVARALGYSGSPETLDSAVSPRGHRLL
AKVPRLPGAIIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=649855 OHS70_RS16110 WP_328398041.1 3742035..3743186(+) (disA) [Streptomyces sp. NBC_00390]
GTGGCAGCCAAGGACGGGGCAACAGCACCCGGGAAGTCCGGCTCAGGCACGGGCAACGAAGCGCTGATCCGCGCCGCTCT
GAGCGCGGTCGCCCCGGGCACCGCACTGCGCGACGGCCTGGAACGCATCCTCCGGGGAAACACCGGAGGTCTGATCGTTC
TCGGCATGGACAAGTCGGTCGAGTCGATGTGTACCGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTGGACGGAGCGCTCATCCTCGACAAGGACATCTCCAAGATCCACCGGGCCGGTGTGCAGCTGGTCCC
GGACGCGTCCATCCCTACCGAGGAGACCGGCACCCGCCACCGCACCGCGGACCGGGTCTCGCGTCAGTGCGGGTTCCCCG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGCCGGGTGCTGGAGGAGTCGGCCGCG
ATCCTGTCCCGCGCCAACCAGGCACTGGCGACCCTGGAGCGCTACAAGCTCCGTCTGGACGAGGTGGCCGGCACCCTCTC
GGCCCTGGAGATCGAGGACCTGGTCACCGTCCGGGACGTCGGGGCCGTGGCGCAGCGCCTGGAGATGGTGCGCCGTATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGCCTTCTCTCGCTCCAGCTGGACGAGTTGATCGCG
GGTGTGGAGCCGGAGCGCGATCTGGTGGTGCGCGACTACGTGCCGGAGCCGACCTCCCCCAGGGCTGTGCCCGGGAGGGG
CCCCCAGCGCTCGCGCACGGTCGACGAGGCGCTCGCCGAGCTGGACGCGCTGACCCACACCGAACTGCTCGAACTGCCCG
TCGTGGCCAGGGCGCTGGGCTACAGCGGCTCTCCTGAGACGCTCGACTCCGCGGTCTCGCCGCGTGGCCACCGGCTGCTG
GCCAAGGTGCCCCGGCTGCCCGGCGCCATCATCGAGCGGCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCGGC
AAGCGTGGACGATCTGCAGGCCGTGGACGGCGTCGGCGAGGCTCGGGCCCGCAGCGTACGGGAGGGGCTGTCGCGGCTCG
CCGAGTCGTCGATCCTGGAGCGCTACGTCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.054

96.606

0.426