Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS81_RS15410 Genome accession   NZ_CP107940
Coordinates   3509539..3510663 (+) Length   374 a.a.
NCBI ID   WP_328385341.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00400     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3504539..3515663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS81_RS15395 (OHS81_15400) - 3504926..3505831 (+) 906 WP_328385338.1 hypothetical protein -
  OHS81_RS15400 (OHS81_15405) - 3505910..3507736 (-) 1827 WP_328385339.1 sigma-70 family RNA polymerase sigma factor -
  OHS81_RS15405 (OHS81_15410) radA/sms 3508002..3509414 (+) 1413 WP_328385340.1 DNA repair protein RadA Machinery gene
  OHS81_RS15410 (OHS81_15415) disA 3509539..3510663 (+) 1125 WP_328385341.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS81_RS15415 (OHS81_15420) - 3510777..3511769 (-) 993 WP_328385342.1 NAD-dependent epimerase/dehydratase family protein -
  OHS81_RS15420 (OHS81_15425) - 3511867..3512697 (-) 831 WP_328385343.1 hypothetical protein -
  OHS81_RS15425 (OHS81_15430) - 3512857..3513381 (-) 525 WP_328385344.1 pyridoxamine 5'-phosphate oxidase -
  OHS81_RS15430 (OHS81_15435) - 3513574..3514533 (+) 960 WP_328385345.1 A/G-specific adenine glycosylase -
  OHS81_RS15435 (OHS81_15440) - 3514961..3515512 (+) 552 WP_086721827.1 SigE family RNA polymerase sigma factor -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40264.08 Da        Isoelectric Point: 5.0061

>NTDB_id=649720 OHS81_RS15410 WP_328385341.1 3509539..3510663(+) (disA) [Streptomyces sp. NBC_00400]
MAANDRASTSGRSGGSSGTESLMRATLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGALVLDKDITKILRAGVQLVPDASIPTEETGTRHRTAQRVSIQAGFPVVSVSQSMRLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPERELVVRDYVPQPTAKRSRTVVEALAELDALSHTELLELPTVARALGYSGAPETLDSAVSPRGFRLLAKVPRLPGT
VIDRLVDHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649720 OHS81_RS15410 WP_328385341.1 3509539..3510663(+) (disA) [Streptomyces sp. NBC_00400]
GTGGCAGCCAACGACCGGGCATCGACTTCCGGCAGGTCCGGTGGAAGCTCCGGCACCGAGAGCCTGATGCGCGCCACGCT
GAGCGCCGTCGCGCCCGGTACCGCCCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAATACGGGAGGGCTGATCGTGC
TGGGCTTCGACAAGACCGTCGAATCCATGTGTACCGGCGGATTCGTCCTGGATGTCGAGTTCACCGCCACGCGGCTGCGC
GAACTGTGCAAGCTCGACGGGGCGCTGGTCCTCGACAAGGACATCACCAAAATCCTGCGGGCCGGCGTCCAGCTGGTCCC
GGACGCCTCCATCCCCACGGAGGAGACCGGCACCCGCCACCGCACCGCCCAGCGCGTCTCGATCCAGGCCGGCTTCCCGG
TCGTCTCCGTCAGCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCGAGCGCCGCGTCCTGGAGGAGTCGGCCGCG
ATCCTCTCCCGCGCCAACCAGGCACTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCCGGCACGCTCTC
CGCCCTGGAGATCGAGGACTTGGTGACGGTCCGCGATGTCACCGCGGTCGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CCACGGAAATCGCCGAGTACGTCGTCGAGCTCGGCACGGACGGCCGGCTGCTCGCCCTCCAGTTGGAGGAGCTGATCGCC
GGTGTGGAGCCGGAGCGGGAGCTGGTCGTCCGCGACTACGTCCCCCAGCCGACCGCCAAGCGCTCCCGCACGGTCGTCGA
AGCGCTCGCCGAGCTGGACGCCCTCAGCCACACCGAACTGCTCGAACTCCCCACGGTGGCCCGCGCGTTGGGCTACAGCG
GAGCCCCCGAGACGCTGGACTCCGCGGTCTCCCCGCGCGGCTTCCGCCTGCTGGCGAAGGTCCCCCGGCTGCCCGGCACG
GTCATCGACCGCCTCGTCGACCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCCAGCGTCGACGACCTGCAGACGGTCGA
CGGCGTCGGCGAGGCCCGCGCCCGCTCGGTCCGCGAGGGCCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.571

93.583

0.417