Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS82_RS18940 Genome accession   NZ_CP107928
Coordinates   4431887..4433011 (+) Length   374 a.a.
NCBI ID   WP_057577693.1    Uniprot ID   A0ABU0Q5M6
Organism   Streptomyces sp. NBC_00425     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4426887..4438011
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS82_RS18925 (OHS82_18935) - 4427425..4428231 (+) 807 WP_057577690.1 hypothetical protein -
  OHS82_RS18930 (OHS82_18940) - 4428365..4430176 (-) 1812 WP_063894241.1 hypothetical protein -
  OHS82_RS18935 (OHS82_18945) radA/sms 4430396..4431805 (+) 1410 WP_057577692.1 DNA repair protein RadA Machinery gene
  OHS82_RS18940 (OHS82_18950) disA 4431887..4433011 (+) 1125 WP_057577693.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS82_RS18945 (OHS82_18955) - 4433091..4433942 (-) 852 WP_328434189.1 hypothetical protein -
  OHS82_RS18950 (OHS82_18960) - 4434180..4435118 (+) 939 WP_328434190.1 A/G-specific adenine glycosylase -
  OHS82_RS18955 (OHS82_18965) - 4435520..4436062 (+) 543 WP_057577696.1 SigE family RNA polymerase sigma factor -
  OHS82_RS18960 (OHS82_18970) - 4436137..4436781 (+) 645 WP_057578083.1 hypothetical protein -
  OHS82_RS18965 (OHS82_18975) cseB 4436981..4437682 (+) 702 WP_057577697.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40065.83 Da        Isoelectric Point: 5.0961

>NTDB_id=649542 OHS82_RS18940 WP_057577693.1 4431887..4433011(+) (disA) [Streptomyces sp. NBC_00425]
MAANDRAAAPGKSGGSSGSDGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLNVEFAATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPMIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALHELDALTHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFSSLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649542 OHS82_RS18940 WP_057577693.1 4431887..4433011(+) (disA) [Streptomyces sp. NBC_00425]
GTGGCAGCCAACGACCGGGCGGCAGCTCCCGGAAAGTCCGGTGGGAGTTCCGGTTCCGACGGCCTGATGCGCGCCGCGCT
GAGCGCGGTGGCCCCCGGCACGGCCCTGCGCGACGGCCTGGAGAGGATCCTCCGCGGCAACACCGGCGGGCTGATCGTGC
TGGGCTCCGACAAGACGGTCGAAGCGATGTGCACGGGCGGGTTCGTCCTGAACGTGGAGTTCGCGGCCACGCGCCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCCGACCTGTCGAAGATCCTCCGGGCCGGCGTCCAGCTGGTGCC
CGATCCCATGATCCCCACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCAGCAAGCAGGTCGGCTTCCCGG
TCGTCTCGGTCTCGCAGTCCATGCGCCTGATCGCCCTGTACGTCGACGGGCAGCGCCGGGTCCTGGAGGACTCCGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCCACCCTGGAGCGCTACAAACTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCGGCGGTGGCCCAGCGACTGGAGATGGTGCGTCGCATCG
CCACCGAAATCGCCGAATACGTGGTCGAACTGGGCACGGACGGACGACTGCTCGCCCTCCAGCTCGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAACTGGTGGTCCGGGACTACGTCCCCGAGCCGACGGCCAAGCGTTCCCGCACGGTCGACGA
GGCGCTGCACGAACTGGACGCGCTCACCCACGCCGAGCTCCTGGAACTGTCCACGGTCGCCCGCGCGCTGGGCTACACCG
GCTCCCCCGAGGCACTGGACTCGGCGGTGTCCCCACGCGGCTTCCGCCTGCTGGCGAAGGTGCCGCGCCTCCCCGGAGCC
ATCATCGACCGTCTCGTGGAGCACTTCAGCAGCCTGCAGAAGCTGCTCGCCGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCGCGGGCCCGCAGCGTCCGCGAGGGCCTGTCCCGACTGGCCGAGTCCTCGATCCTGGAGCGTTACG
TCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436