Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG389_RS21765 Genome accession   NZ_CP107924
Coordinates   4732377..4733501 (-) Length   374 a.a.
NCBI ID   WP_328300141.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00435     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4727377..4738501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG389_RS21735 (OG389_21735) cseB 4727559..4728266 (-) 708 WP_328300135.1 two-component system response regulator CseB -
  OG389_RS21740 (OG389_21740) - 4728331..4728984 (-) 654 WP_328300136.1 hypothetical protein -
  OG389_RS21745 (OG389_21745) - 4729023..4729583 (-) 561 WP_328300137.1 SigE family RNA polymerase sigma factor -
  OG389_RS21750 (OG389_21750) - 4729671..4730681 (-) 1011 WP_328300138.1 A/G-specific adenine glycosylase -
  OG389_RS21755 (OG389_21755) - 4730711..4731319 (-) 609 WP_328300139.1 phosphatase PAP2 family protein -
  OG389_RS21760 (OG389_21760) - 4731480..4732298 (+) 819 WP_328300140.1 hypothetical protein -
  OG389_RS21765 (OG389_21765) disA 4732377..4733501 (-) 1125 WP_328300141.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG389_RS21770 (OG389_21770) radA/sms 4733645..4735063 (-) 1419 WP_328300142.1 DNA repair protein RadA Machinery gene
  OG389_RS21775 (OG389_21775) - 4735221..4737080 (+) 1860 WP_328300143.1 hypothetical protein -
  OG389_RS21780 (OG389_21780) - 4737132..4737998 (-) 867 WP_328300144.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40388.35 Da        Isoelectric Point: 5.1189

>NTDB_id=649474 OG389_RS21765 WP_328300141.1 4732377..4733501(-) (disA) [Streptomyces sp. NBC_00435]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALPALDALTHPELLELAIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649474 OG389_RS21765 WP_328300141.1 4732377..4733501(-) (disA) [Streptomyces sp. NBC_00435]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCCAGCTCCAAGCAGGAGGCCATGATGCGCGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCGCTGCGTGACGGGCTGGAACGGATCGTCCGCGGCAACACCGGAGGGCTGATCGTCC
TCGGCATGGACAAGTCCGTCGAGGCGATGTGCACCGGCGGATTCGTCCTCGACGTGGAGTTCACCGCGACCCGGCTGCGT
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACATCACCAAGATCCTCCGGGCGGGCGTCCAGCTGGTGCC
GGACGCGTCCATCCACACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGGGTCTCGAAGCAGTGCGGCTTCCCGG
TGGTGTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGTCTGGACGAGGTCGCCGGGACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCGGTGGCACAGCGGCTGGAAATGGTGCGGCGCATCG
CGACGGAAATCGCGGAGTACGTGGTCGAACTCGGCACGGACGGCCGTCTGCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGGGAGCTCGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGCCGGCCCTGGACGCGCTGACCCATCCGGAGCTGCTGGAACTGGCGATCGTGGCGCGGGCCCTGGGTTACACGG
GCTCGCCGGAAACCCTGGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTTCCGCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCAAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTGGGCGAGGCCCGTGCGCGCAGCGTCCGCGAGGGTCTGTCCCGCCTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441