Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHR86_RS13535 Genome accession   NZ_CP107919
Coordinates   3036647..3037771 (+) Length   374 a.a.
NCBI ID   WP_328900824.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00441     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3031647..3042771
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHR86_RS13520 (OHR86_13535) - 3032250..3033122 (+) 873 WP_328900821.1 hypothetical protein -
  OHR86_RS13525 (OHR86_13540) - 3033136..3034974 (-) 1839 WP_328900822.1 hypothetical protein -
  OHR86_RS13530 (OHR86_13545) radA/sms 3035109..3036521 (+) 1413 WP_328900823.1 DNA repair protein RadA Machinery gene
  OHR86_RS13535 (OHR86_13550) disA 3036647..3037771 (+) 1125 WP_328900824.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHR86_RS13540 (OHR86_13555) - 3037800..3038567 (-) 768 WP_328904373.1 hypothetical protein -
  OHR86_RS13545 (OHR86_13560) - 3038901..3039803 (+) 903 WP_328900825.1 A/G-specific adenine glycosylase -
  OHR86_RS13550 (OHR86_13565) - 3040109..3040657 (+) 549 WP_018102282.1 SigE family RNA polymerase sigma factor -
  OHR86_RS13555 (OHR86_13570) - 3040645..3041370 (+) 726 WP_328900826.1 hypothetical protein -
  OHR86_RS13560 (OHR86_13575) cseB 3041381..3042085 (+) 705 WP_328900827.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40436.40 Da        Isoelectric Point: 5.0161

>NTDB_id=649313 OHR86_RS13535 WP_328900824.1 3036647..3037771(+) (disA) [Streptomyces sp. NBC_00441]
MAASDRAASPGKSGQTTGNEALMRASLSAVAPGMALRDGLERILRGNTGALIVLGMDKTVESMCTGGFVLDVEFTATRLR
ELAKLDGALILDKDMTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVNGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVAEALTELDSLTHTELLELPVVARALGYSGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=649313 OHR86_RS13535 WP_328900824.1 3036647..3037771(+) (disA) [Streptomyces sp. NBC_00441]
GTGGCAGCCAGCGACCGGGCAGCATCGCCCGGAAAGTCCGGCCAAACCACGGGCAACGAGGCGCTGATGCGCGCCTCGTT
GAGCGCCGTCGCGCCCGGAATGGCCCTGCGGGACGGCCTGGAGCGCATTCTCCGCGGCAACACCGGGGCTCTGATCGTGC
TCGGCATGGACAAGACCGTCGAGTCGATGTGCACGGGCGGCTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGGCCAAGCTGGACGGCGCCCTGATCCTCGACAAGGACATGACGAAGATCCTGCGCGCCGGGGTGCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCAATTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGAACGGGGAGCGGCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCCCTCGCCACCCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTCGCCGGGACGCTCTC
GGCGCTGGAGATCGAGGACCTGGTGACCGTCCGGGACGTGACGGCGGTGGCCCAGCGCCTGGAGATGGTCCGCCGGATCG
CGACGGAGATCGCGGAGTACGTGGTGGAGCTCGGCACGGACGGACGGTTGCTGTCGCTCCAGCTGGACGAGCTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTCGTGAGGGACTACGTGCCGGAGCCGACGGCGAAGCGTTCGCGCACGGTGGCGGA
GGCGCTGACCGAGCTGGACTCGCTGACCCACACGGAGCTGCTCGAACTTCCGGTGGTGGCGAGGGCGCTGGGCTACAGCG
GTTCGCCCGAGACGCTGGACTCGGCGGTGTCGCCGCGCGGTTTCCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGCGCG
ATCATCGACCGGCTCGTGGAGCACTTCGGCGGTCTGCAGAAGCTGCTCGCGGCGAGCGTGGACGACCTCCAGACGGTGGA
CGGCGTCGGCGAGGCCCGGGCGCGCAGCGTGCGCGAGGGCCTGTCCCGGCTGGCCGAGTCGTCCATCCTCGAACGTTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.321

96.524

0.428