Detailed information NTG0648979

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG800_RS33145
• Genome accession: NZ_CP107914
• Coordinates: 7202866..7204152 (+)
• Length: 428 a.a.
• NCBI ID: WP_328372359.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00445
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7197866..7209152

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG800_RS33115 (OG800_33095)	-	7198869..7199063 (+)	195	WP_210577588.1	hypothetical protein	-
OG800_RS33130 (OG800_33110)	tig	7199590..7200984 (+)	1395	WP_328364490.1	trigger factor	-
OG800_RS33135 (OG800_33115)	clpP	7201335..7201949 (+)	615	WP_328364492.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG800_RS33140 (OG800_33120)	clpP	7202001..7202681 (+)	681	WP_328364494.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG800_RS33145 (OG800_33125)	clpX	7202866..7204152 (+)	1287	WP_328372359.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG800_RS33150 (OG800_33130)	-	7204229..7205215 (-)	987	WP_328364496.1	hypothetical protein	-
OG800_RS33155 (OG800_33135)	-	7205352..7207976 (+)	2625	WP_328364498.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46837.60 Da
• Isoelectric Point: 4.7866

>NTDB_id=648979 OG800_RS33145 WP_328372359.1 7202866..7204152(+) (clpX) [Streptomyces sp. NBC_00445]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
AEVVHSNVNPTLIPRDARGRGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=648979 OG800_RS33145 WP_328372359.1 7202866..7204152(+) (clpX) [Streptomyces sp. NBC_00445]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACCA
GCGAGGTGCGCTGGGAGGAACTCCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCT
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGCCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCCCAGA
CCCTCGCGCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCAGGGATGTGAGCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCCGTGCCGCCGCAGGGCGGGCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCCGGACTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACGAGCGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAACGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGATCCCGTCCCGCAAGGACGTAGCCCGCGTCGTCATCACC
GCCGAGGTCGTCCACTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGAGGGCGGGGCTCGGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526