Detailed information NTG0648619

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG828_RS32450
• Genome accession: NZ_CP107905
• Coordinates: 7108436..7109722 (+)
• Length: 428 a.a.
• NCBI ID: WP_328372359.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00457
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7103436..7114722

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG828_RS32420 (OG828_32390)	-	7104438..7104632 (+)	195	WP_210577588.1	hypothetical protein	-
OG828_RS32435 (OG828_32405)	tig	7105160..7106554 (+)	1395	WP_328503149.1	trigger factor	-
OG828_RS32440 (OG828_32410)	clpP	7106905..7107519 (+)	615	WP_328364492.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG828_RS32445 (OG828_32415)	clpP	7107571..7108251 (+)	681	WP_328364494.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG828_RS32450 (OG828_32420)	clpX	7108436..7109722 (+)	1287	WP_328372359.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG828_RS32455 (OG828_32425)	-	7109799..7110785 (-)	987	WP_328503150.1	hypothetical protein	-
OG828_RS32460 (OG828_32430)	-	7110922..7113546 (+)	2625	WP_328503151.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46837.60 Da
• Isoelectric Point: 4.7866

>NTDB_id=648619 OG828_RS32450 WP_328372359.1 7108436..7109722(+) (clpX) [Streptomyces sp. NBC_00457]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
AEVVHSNVNPTLIPRDARGRGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=648619 OG828_RS32450 WP_328372359.1 7108436..7109722(+) (clpX) [Streptomyces sp. NBC_00457]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACCA
GCGAGGTGCGCTGGGAGGAACTCCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCT
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGCCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCCCAGA
CCCTCGCGCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCAGGGATGTGAGCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCCGTGCCGCCGCAGGGCGGGCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCCGGACTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACGAGCGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAACGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTGATGTACGAGATCCCGTCCCGCAAGGACGTAGCCCGCGTCGTCATCACC
GCCGAGGTCGTCCACTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGAGGGCGGGGCTCGGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526