Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   LQ060_RS05515 Genome accession   NZ_CP091221
Coordinates   1138226..1139494 (+) Length   422 a.a.
NCBI ID   WP_002308899.1    Uniprot ID   A0AAW9N158
Organism   Enterococcus faecium strain 642     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1133226..1144494
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LQ060_RS05490 (LQ060_05490) tsf 1133962..1134843 (+) 882 WP_002293878.1 translation elongation factor Ts -
  LQ060_RS05495 (LQ060_05495) pyrH 1134979..1135701 (+) 723 WP_002293877.1 UMP kinase -
  LQ060_RS05500 (LQ060_05500) frr 1135704..1136261 (+) 558 WP_002293875.1 ribosome recycling factor -
  LQ060_RS05505 (LQ060_05505) - 1136456..1137268 (+) 813 WP_002308897.1 isoprenyl transferase -
  LQ060_RS05510 (LQ060_05510) - 1137265..1138065 (+) 801 WP_002308898.1 phosphatidate cytidylyltransferase -
  LQ060_RS05515 (LQ060_05515) eeP 1138226..1139494 (+) 1269 WP_002308899.1 RIP metalloprotease RseP Regulator
  LQ060_RS05520 (LQ060_05520) - 1139562..1141271 (+) 1710 WP_002308900.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46061.54 Da        Isoelectric Point: 4.8405

>NTDB_id=648534 LQ060_RS05515 WP_002308899.1 1138226..1139494(+) (eeP) [Enterococcus faecium strain 642]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIETDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIIPNGAAAEAGLKENDKVVSVDGKEIHTWN
DLTTVITKNPGKTLDFEIEREGKMQSVDVTPKSVESNGEKVGQLGIQAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVIGLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=648534 LQ060_RS05515 WP_002308899.1 1138226..1139494(+) (eeP) [Enterococcus faecium strain 642]
ATGAAAACGATACTAACATTTATCATTGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGTATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCAATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGATGAAACAG
AAGTAGTGACCTATCCTGTCGATCACGATGCGACGATTATTGAAACCGACGGAACAGAAATCAGAATTGCACCAAAAGAT
GTACAGTTCCAATCGGCTAAACTGTGGCAGCGTATGCTGACCAATTTTGCCGGTCCAATGAATAACTTTATCTTGGCAAT
CGTGTTATTTATTATTCTTGCATTCATGCAAGGCGGTGTTCAAGTGACAAATACTAATCGTGTAGGAGAGATTATCCCTA
ATGGTGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATAAGGTAGTTAGCGTGGACGGTAAAGAAATCCACACTTGGAAC
GATTTGACAACAGTCATCACGAAAAATCCAGGTAAAACATTAGATTTTGAGATCGAACGAGAAGGTAAGATGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGCATACAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATCGGCGGAACACGTCAAGCTTTTAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTGTTT
ACAGGTTTTAGTTTAGATAAATTAGGCGGACCTGTTATGATGTACCAATTATCTTCAGAAGCAGCAAACCAAGGTGTAAC
AACTGTTATTGGTTTGATGGCGCTTCTTTCAATGAACCTTGGAATCGTCAATCTGCTTCCGATCCCTGCCTTAGATGGTG
GGAAATTAGTGTTGAATATTTTTGAAGGGATTCGTGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(199-270)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

53.972

100

0.547
  eeP Streptococcus thermophilus LMG 18311

53.738

100

0.545