Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHN74_RS17905 Genome accession   NZ_CP107903
Coordinates   4103205..4104329 (+) Length   374 a.a.
NCBI ID   WP_327695548.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00459     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4098205..4109329
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHN74_RS17890 (OHN74_17890) - 4098883..4099677 (+) 795 WP_327700171.1 hypothetical protein -
  OHN74_RS17895 (OHN74_17895) - 4099694..4101496 (-) 1803 WP_327695545.1 hypothetical protein -
  OHN74_RS17900 (OHN74_17900) radA/sms 4101714..4103123 (+) 1410 WP_327695546.1 DNA repair protein RadA Machinery gene
  OHN74_RS17905 (OHN74_17905) disA 4103205..4104329 (+) 1125 WP_327695548.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHN74_RS17910 (OHN74_17910) - 4104443..4105291 (-) 849 WP_327695549.1 hypothetical protein -
  OHN74_RS17915 (OHN74_17915) - 4105652..4106593 (+) 942 WP_327695550.1 A/G-specific adenine glycosylase -
  OHN74_RS17920 (OHN74_17920) - 4106889..4107431 (+) 543 WP_006374267.1 SigE family RNA polymerase sigma factor -
  OHN74_RS17925 (OHN74_17925) - 4107599..4108246 (+) 648 WP_327695551.1 hypothetical protein -
  OHN74_RS17930 (OHN74_17930) cseB 4108321..4109028 (+) 708 WP_327695552.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39978.73 Da        Isoelectric Point: 4.9130

>NTDB_id=648496 OHN74_RS17905 WP_327695548.1 4103205..4104329(+) (disA) [Streptomyces sp. NBC_00459]
MAANDRAAAPGKYGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFSATRLR
ELCKLDGGIVVSSDLSKILRAGVQLVPDPNIPTEETGTRHRTADRVSKQVAYSVISVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVVQRLEMVRLIATEIAGYVLELGTDGRLLALQLEELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALAELDALSHAELLELSTVAKALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=648496 OHN74_RS17905 WP_327695548.1 4103205..4104329(+) (disA) [Streptomyces sp. NBC_00459]
GTGGCAGCCAACGACCGGGCAGCAGCTCCAGGAAAGTACGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCGCTGCGCGACGGGCTTGAACGGATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TGGGCTCCGACAAGACCGTCGAGGCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCTCGGCGACGCGGCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGGACCTGTCCAAGATCCTGCGGGCCGGCGTACAGCTGGTCCC
CGACCCGAACATCCCCACCGAGGAGACGGGCACCCGGCACCGCACCGCCGACCGCGTGTCGAAGCAGGTGGCCTACTCGG
TGATCTCCGTCTCCCAGTCCATGAGACTCATCGCGCTGTACGTGGACGGCCAGCGCCGGGTCCTGGAGGACTCTGCCGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTCGACGAGGTCGCGGGCACACTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGGGACGTCTCCGCGGTGGTGCAACGCCTGGAGATGGTCCGCCTCATCG
CGACGGAAATCGCCGGGTACGTGCTCGAACTGGGCACCGACGGGCGGCTTCTGGCCCTCCAGCTGGAGGAGTTGATCGCG
GGCGTGGAGCCGGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCACTCGCCGAACTCGACGCGCTCAGCCACGCCGAACTGCTCGAACTCTCCACGGTGGCCAAGGCCCTGGGCTACACGG
GCTCACCCGAGACGCTCGACTCGGCGGTCTCCCCCCGCGGCTTCCGCCTCCTGGCGAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGGGGCCTGCAGAAGCTGCTGGCGGCGAGCGTCGACGACCTCCAGACGGTGGA
CGGGGTCGGCGAGGCGAGGGCGCGCAGCGTGCGGGAAGGACTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAGCGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433