Detailed information NTG0648358

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG912_RS23735
• Genome accession: NZ_CP107899
• Coordinates: 5280501..5281799 (+)
• Length: 432 a.a.
• NCBI ID: WP_326736179.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00464
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5275501..5286799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG912_RS23705 (OG912_23705)	-	5276538..5276732 (+)	195	WP_123471025.1	hypothetical protein	-
OG912_RS23720 (OG912_23720)	tig	5277312..5278706 (+)	1395	WP_327711158.1	trigger factor	-
OG912_RS23725 (OG912_23725)	-	5278974..5279579 (+)	606	WP_168713553.1	ATP-dependent Clp protease proteolytic subunit	-
OG912_RS23730 (OG912_23730)	clpP	5279660..5280343 (+)	684	WP_306070064.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG912_RS23735 (OG912_23735)	clpX	5280501..5281799 (+)	1299	WP_326736179.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG912_RS23740 (OG912_23740)	-	5281874..5282839 (-)	966	WP_327711159.1	hypothetical protein	-
OG912_RS23745 (OG912_23745)	-	5282979..5285600 (+)	2622	WP_327711160.1	valine--tRNA ligase	-
OG912_RS23750 (OG912_23750)	-	5285676..5285912 (-)	237	WP_327711161.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47394.18 Da
• Isoelectric Point: 4.8363

>NTDB_id=648358 OG912_RS23735 WP_326736179.1 5280501..5281799(+) (clpX) [Streptomyces sp. NBC_00464]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
SDVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=648358 OG912_RS23735 WP_326736179.1 5280501..5281799(+) (clpX) [Streptomyces sp. NBC_00464]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGCTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTTCCAGCCG
CGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TCCTCAAGATCCTTGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGTGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACC
TCGGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGACGGGCG
GCACGAGAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	93.056	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516