Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG210_RS11910 Genome accession   NZ_CP107896
Coordinates   2702468..2703592 (+) Length   374 a.a.
NCBI ID   WP_328329764.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00466 strain NBC 00466     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 2697468..2708592
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG210_RS11895 (OG210_11890) - 2698231..2699061 (+) 831 WP_328329771.1 hypothetical protein -
  OG210_RS11900 (OG210_11895) - 2699125..2700831 (-) 1707 WP_328329769.1 hypothetical protein -
  OG210_RS11905 (OG210_11900) radA/sms 2701014..2702411 (+) 1398 WP_328329767.1 DNA repair protein RadA Machinery gene
  OG210_RS11910 (OG210_11905) disA 2702468..2703592 (+) 1125 WP_328329764.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG210_RS11915 (OG210_11910) - 2703696..2704544 (-) 849 WP_328335557.1 hypothetical protein -
  OG210_RS11920 (OG210_11915) - 2704728..2705336 (+) 609 WP_328329762.1 phosphatase PAP2 family protein -
  OG210_RS11925 (OG210_11920) - 2705353..2706408 (+) 1056 WP_371536249.1 A/G-specific adenine glycosylase -
  OG210_RS11930 (OG210_11925) - 2706584..2707135 (+) 552 WP_266854649.1 SigE family RNA polymerase sigma factor -
  OG210_RS11935 (OG210_11930) - 2707252..2707875 (+) 624 WP_328329757.1 hypothetical protein -
  OG210_RS11940 (OG210_11935) cseB 2707888..2708586 (+) 699 WP_328329755.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40272.15 Da        Isoelectric Point: 5.0132

>NTDB_id=648265 OG210_RS11910 WP_328329764.1 2702468..2703592(+) (disA) [Streptomyces sp. NBC_00466 strain NBC 00466]
MAANDRAAPGRSGGSSSGNEALMRATLSAVAPGTALRDGLERILRGNTGGLIVLGMDKSVEAMCTGGFVMDVEFAATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMHLIALYVDGERRVLEESAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVTEALVDLNTLSHTELLELPVVARALGYSGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=648265 OG210_RS11910 WP_328329764.1 2702468..2703592(+) (disA) [Streptomyces sp. NBC_00466 strain NBC 00466]
GTGGCAGCCAATGACCGAGCAGCACCCGGGAGATCCGGCGGGAGCTCGTCCGGCAATGAAGCGCTGATGCGTGCCACGCT
GAGCGCTGTCGCGCCCGGTACCGCGCTGCGCGACGGCCTGGAGCGGATCCTCCGCGGGAACACCGGCGGCCTCATCGTCC
TGGGCATGGACAAGAGCGTCGAAGCGATGTGCACCGGCGGTTTCGTCATGGACGTGGAGTTCGCCGCGACCCGCCTGCGG
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTCGACAAGGATCTGACCAAGATTCTCCGGGCCGGCGTCCAGCTGGTCCC
GGACGCGTCGATCCCCACCGAGGAGACCGGCACCCGCCACCGCACGGCGGACCGGGTCTCCAAGCAGTGCGGCTTCCCCG
TCGTCTCCGTATCGCAGTCGATGCACCTGATCGCGCTGTACGTGGACGGGGAGCGCCGGGTCCTGGAGGAGTCGGCGGCG
ATCCTGTCCCGCGCCAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGGCTGGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTGACGGCGGTCGCGCAGCGTCTTGAGATGGTCCGGCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTGGGCACCGACGGCCGGCTGCTCTCCCTCCAGCTGGACGAGCTGATCGCC
GGGGTCGAGCCCGAGCGGGAGCTGGTGGTCAGAGACTATGTGCCGGAGCCGACGGCGAAGCGTTCGCGCACGGTCACCGA
GGCACTGGTCGACCTCAACACGCTCAGCCACACGGAGCTGCTCGAACTTCCCGTGGTGGCAAGGGCGTTGGGATACAGCG
GCTCCCCGGAGACGCTCGACTCGGCGGTGTCGCCGCGCGGGTACCGGCTGCTGGCCAAGGTGCCGAGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGCGGGCTGCAGAAGCTGCTCGCTGCGAGCGTGGACGATCTGCAGGCGGTGGA
CGGGGTCGGGGAGGCGCGGGCCCGCAGCGTCCGGGAGGGGCTTTCGCGGCTCGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.045

94.652

0.436