Detailed information NTG0648207

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG803_RS23385
• Genome accession: NZ_CP107894
• Coordinates: 5127312..5128595 (+)
• Length: 427 a.a.
• NCBI ID: WP_313946325.1
• Uniprot ID: A0ACC6PUA7
• Organism: Streptomyces sp. NBC_00467
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5122312..5133595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG803_RS23350 (OG803_23380)	-	5122331..5122525 (+)	195	WP_313946321.1	hypothetical protein	-
OG803_RS23355 (OG803_23385)	-	5122617..5123639 (+)	1023	WP_327684209.1	alcohol dehydrogenase	-
OG803_RS23370 (OG803_23400)	tig	5124194..5125582 (+)	1389	WP_327684211.1	trigger factor	-
OG803_RS23375 (OG803_23405)	-	5125822..5126427 (+)	606	WP_327686879.1	ATP-dependent Clp protease proteolytic subunit	-
OG803_RS23380 (OG803_23410)	clpP	5126483..5127166 (+)	684	WP_313946324.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG803_RS23385 (OG803_23415)	clpX	5127312..5128595 (+)	1284	WP_313946325.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG803_RS23390 (OG803_23420)	-	5128672..5129640 (-)	969	WP_327684214.1	hypothetical protein	-
OG803_RS23395 (OG803_23425)	-	5129777..5132401 (+)	2625	WP_327684216.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46714.55 Da
• Isoelectric Point: 4.8265

>NTDB_id=648207 OG803_RS23385 WP_313946325.1 5127312..5128595(+) (clpX) [Streptomyces sp. NBC_00467]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
EDVVHNNVNPTLVPRVVKNEGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=648207 OG803_RS23385 WP_313946325.1 5127312..5128595(+) (clpX) [Streptomyces sp. NBC_00467]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGTGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAAAAGGCCCTCTCGGTGGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGAGGCGCGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CGCTCGCCCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGATATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGGGACGTGTCCGGTGAGGGCGTCCAGCAGGCGT
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTACTCTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGAGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGTGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTCCAGATCCTGGTCGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCGATCGCGGACCAGGCGATCCTGCGCGGCACGGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GAGGACGTGGTCCACAACAACGTGAACCCGACGCTGGTGCCGCGGGTCGTGAAGAACGAGGGGCGCCACGAGAAGTCGGC
GTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.269	96.721	0.515