Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   L1776_RS03140 Genome accession   NZ_CP091174
Coordinates   676525..676932 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain XX1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 671525..681932
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1776_RS03110 - 671694..672710 (-) 1017 WP_236451263.1 aspartate carbamoyltransferase catalytic subunit -
  L1776_RS03115 pyrR 672764..673279 (-) 516 WP_011914963.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  L1776_RS03120 ruvX 673297..673725 (-) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  L1776_RS03125 - 673722..674291 (-) 570 WP_053528280.1 YqgE/AlgH family protein -
  L1776_RS03130 - 674357..675250 (-) 894 WP_019405529.1 energy transducer TonB -
  L1776_RS03135 gshB 675338..676288 (-) 951 WP_014597995.1 glutathione synthase -
  L1776_RS03140 pilG 676525..676932 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  L1776_RS03145 pilH 676977..677342 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  L1776_RS03150 - 677384..677920 (+) 537 WP_013984316.1 chemotaxis protein CheW -
  L1776_RS03155 - 677999..680047 (+) 2049 WP_236451266.1 methyl-accepting chemotaxis protein -
  L1776_RS03160 - 680108..680974 (+) 867 WP_079328555.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=648148 L1776_RS03140 WP_003282729.1 676525..676932(+) (pilG) [Stutzerimonas stutzeri strain XX1]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=648148 L1776_RS03140 WP_003282729.1 676525..676932(+) (pilG) [Stutzerimonas stutzeri strain XX1]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCCAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4