Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHV16_RS21510 Genome accession   NZ_CP107889
Coordinates   4759130..4760254 (+) Length   374 a.a.
NCBI ID   WP_266711290.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00470     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4754130..4765254
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHV16_RS21495 (OHV16_21530) - 4754756..4755637 (+) 882 WP_327662853.1 hypothetical protein -
  OHV16_RS21500 (OHV16_21535) - 4755668..4757380 (-) 1713 WP_327670762.1 hypothetical protein -
  OHV16_RS21505 (OHV16_21540) radA/sms 4757631..4759037 (+) 1407 WP_266711289.1 DNA repair protein RadA Machinery gene
  OHV16_RS21510 (OHV16_21545) disA 4759130..4760254 (+) 1125 WP_266711290.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHV16_RS21515 (OHV16_21550) - 4760331..4761164 (-) 834 WP_327670763.1 hypothetical protein -
  OHV16_RS21520 (OHV16_21555) - 4761351..4762016 (+) 666 WP_327662850.1 phosphatase PAP2 family protein -
  OHV16_RS21525 (OHV16_21560) - 4762095..4762778 (-) 684 WP_327662849.1 response regulator transcription factor -
  OHV16_RS21530 (OHV16_21565) - 4762766..4764358 (-) 1593 WP_327670764.1 histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40051.83 Da        Isoelectric Point: 4.9989

>NTDB_id=648089 OHV16_RS21510 WP_266711290.1 4759130..4760254(+) (disA) [Streptomyces sp. NBC_00470]
MAANDRAATPGKSGGSSGADSLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSNLDKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVARDYVPEPTAKRSRTVPEALVELDALSHAELLELPIVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=648089 OHV16_RS21510 WP_266711290.1 4759130..4760254(+) (disA) [Streptomyces sp. NBC_00470]
GTGGCAGCCAATGACCGGGCGGCAACTCCCGGCAAGTCCGGCGGAAGCTCCGGTGCGGACAGTCTGATGCGCGCCGCGCT
GAGTGCCGTCGCGCCCGGAACCGCCCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGAGGACTCATCGTCC
TCGGCTCCGACAAGACGGTCGAGTCGATGTGCACGGGCGGCTTCATCCTCGACGTGGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAACTCGACGGCGGCATCGTGGTCTCCTCGAACCTCGACAAGATCCTGCGGGCCGGCGTCCAGTTGGTGCC
GGACCCCACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGCTACACCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCGCTGTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTCGTCGAGTTGGGCACGGACGGCCGGCTTCTGGCGCTGCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAACTGGTCGCGCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCCCGCACGGTCCCGGA
GGCGCTGGTCGAGCTGGACGCGCTCAGCCACGCGGAACTGCTCGAACTGCCGATAGTGGCACGGGCACTGGGCTACACCG
GCTCCCCCGAGGCACTCGACTCGGCGGTGTCCCCGCGCGGCTTCCGTCTCCTGGCCAAGGTGCCGCGCCTCCCTGGCGCC
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGCCTGCAGAAGTTGCTGGCCGCGAGCGTGGACGACCTTCAGACGGTCGA
CGGGGTCGGAGAGGCGCGGGCGCGGAGCGTCCGGGAGGGCCTGTCGCGGTTGGCGGAGTCGTCGATCCTCGAGCGGTACG
TATAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.856

96.791

0.444