Detailed information NTG0648031

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG889_RS29660
• Genome accession: NZ_CP107882
• Coordinates: 6845296..6846582 (+)
• Length: 428 a.a.
• NCBI ID: WP_005479362.1
• Uniprot ID: A0A8I0P6X2
• Organism: Streptomyces sp. NBC_00481
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6840296..6851582

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG889_RS29630 (OG889_29680)	-	6841046..6841240 (+)	195	WP_033526477.1	hypothetical protein	-
OG889_RS29645 (OG889_29695)	tig	6841868..6843259 (+)	1392	WP_326582803.1	trigger factor	-
OG889_RS29650 (OG889_29700)	-	6843662..6844270 (+)	609	WP_326585827.1	ATP-dependent Clp protease proteolytic subunit	-
OG889_RS29655 (OG889_29705)	clpP	6844412..6845092 (+)	681	WP_326582804.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG889_RS29660 (OG889_29710)	clpX	6845296..6846582 (+)	1287	WP_005479362.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG889_RS29665 (OG889_29715)	-	6846749..6847699 (-)	951	WP_326582805.1	hypothetical protein	-
OG889_RS29670 (OG889_29720)	-	6847837..6850467 (+)	2631	WP_326582806.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46886.74 Da
• Isoelectric Point: 4.8317

>NTDB_id=648031 OG889_RS29660 WP_005479362.1 6845296..6846582(+) (clpX) [Streptomyces sp. NBC_00481]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIN
ADVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=648031 OG889_RS29660 WP_005479362.1 6845296..6846582(+) (clpX) [Streptomyces sp. NBC_00481]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCG
GCCAAGAAGGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGAAAGAGCGAGAACCCCTCGATCACGCGTGACGTGTCGGGTGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAAGGCACCACGGCGTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGAGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAACTCGAATCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAAGCCCTCCTCCAGATCCTGATCGAGCCTCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTGATGTCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCAAC
GCCGACGTGGTCCGCTCCAACGTCAACCCGACCCTGATTCCGCGGGACGCCCGCGGCCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A8I0P6X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521