Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHA73_RS20265 Genome accession   NZ_CP107880
Coordinates   4564333..4565457 (+) Length   374 a.a.
NCBI ID   WP_266711290.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00483     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 4559333..4570457
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA73_RS20250 (OHA73_20250) - 4560016..4560897 (+) 882 WP_266711287.1 hypothetical protein -
  OHA73_RS20255 (OHA73_20255) - 4560928..4562637 (-) 1710 WP_327655769.1 hypothetical protein -
  OHA73_RS20260 (OHA73_20260) radA/sms 4562834..4564240 (+) 1407 WP_267070079.1 DNA repair protein RadA Machinery gene
  OHA73_RS20265 (OHA73_20265) disA 4564333..4565457 (+) 1125 WP_266711290.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA73_RS20270 (OHA73_20270) - 4565539..4566360 (-) 822 WP_327655770.1 hypothetical protein -
  OHA73_RS20275 (OHA73_20275) - 4566547..4567212 (+) 666 WP_266711292.1 phosphatase PAP2 family protein -
  OHA73_RS20280 (OHA73_20280) - 4567323..4568006 (-) 684 WP_327655771.1 response regulator transcription factor -
  OHA73_RS20285 (OHA73_20285) - 4567994..4569574 (-) 1581 WP_267070077.1 histidine kinase -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40051.83 Da        Isoelectric Point: 4.9989

>NTDB_id=647910 OHA73_RS20265 WP_266711290.1 4564333..4565457(+) (disA) [Streptomyces sp. NBC_00483]
MAANDRAATPGKSGGSSGADSLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSNLDKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVARDYVPEPTAKRSRTVPEALVELDALSHAELLELPIVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=647910 OHA73_RS20265 WP_266711290.1 4564333..4565457(+) (disA) [Streptomyces sp. NBC_00483]
GTGGCAGCCAATGACCGGGCGGCAACTCCCGGCAAGTCCGGCGGAAGCTCCGGTGCGGACAGTCTGATGCGCGCCGCGCT
GAGTGCCGTCGCGCCCGGAACCGCCCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGAGGCCTCATCGTCC
TCGGCTCCGACAAGACGGTCGAGTCGATGTGCACGGGCGGCTTCATCCTCGACGTGGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCGTCTCCTCGAACCTCGACAAGATCCTGCGGGCCGGCGTCCAGTTGGTGCC
GGACCCCACGATCCCCACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGCTACACCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGGGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTGCGCCGCATCG
CGACCGAGATCGCCGAGTACGTCGTCGAGTTGGGCACGGACGGCCGGCTTCTGGCGCTGCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAGCTGGTCGCGCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCCCGCACGGTCCCGGA
GGCGCTGGTCGAGCTGGACGCGCTCAGCCACGCGGAACTGCTCGAACTGCCGATAGTGGCACGGGCCCTGGGCTACACCG
GCTCACCCGAGGCGCTCGACTCGGCGGTGTCCCCGCGCGGGTTCCGGCTCCTGGCCAAGGTGCCGCGCCTCCCTGGCGCC
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGCCTGCAGAAGTTGCTGGCCGCGAGCGTGGACGACCTGCAGACGGTCGA
CGGGGTCGGCGAGGCGCGGGCGCGGAGCGTGCGGGAGGGCCTGTCGCGGTTGGCGGAGTCGTCGATCCTCGAGCGGTACG
TGTAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.856

96.791

0.444