Detailed information NTG0064790

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: SCAZ3_RS06615
• Genome accession: NZ_AIDX01000001
• Coordinates: 1384740..1385663 (+)
• Length: 307 a.a.
• NCBI ID: WP_003046685.1
• Uniprot ID: A0AAV3FQ40
• Organism: Streptococcus canis FSL Z3-227
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1379740..1390663

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SCAZ3_RS06600 (SCAZ3_02010)	amiC	1381240..1382742 (+)	1503	WP_003046676.1	ABC transporter permease	Regulator
SCAZ3_RS06605 (SCAZ3_02015)	amiD	1382742..1383668 (+)	927	WP_003046679.1	oligopeptide ABC transporter permease OppC	Regulator
SCAZ3_RS06610 (SCAZ3_02020)	amiE	1383677..1384747 (+)	1071	WP_003046682.1	ABC transporter ATP-binding protein	Regulator
SCAZ3_RS06615 (SCAZ3_02025)	amiF	1384740..1385663 (+)	924	WP_003046685.1	ATP-binding cassette domain-containing protein	Regulator
SCAZ3_RS06620	tnpA	1385836..1386300 (+)	465	Protein_1274	IS200/IS605 family transposase	-
SCAZ3_RS06625 (SCAZ3_02035)	-	1386637..1387590 (-)	954	WP_003046689.1	IS30 family transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34680.94 Da
• Isoelectric Point: 7.1461

>NTDB_id=64790 SCAZ3_RS06615 WP_003046685.1 1384740..1385663(+) (amiF) [Streptococcus canis FSL Z3-227]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
DANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKTMMTEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELVVYNPDQHDYTVDKPSMVEIKPNHFVWANQAEIKKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=64790 SCAZ3_RS06615 WP_003046685.1 1384740..1385663(+) (amiF) [Streptococcus canis FSL Z3-227]
ATGTCTGAGAAGTTAGTCGAAGTTAAAGACCTAGAAATTTCCTTCGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAGAA
TGCCAATTTCTTCATTAAAAAAGGGGAAACCTTCTCTTTAGTTGGAGAATCTGGTAGCGGAAAAACAACTATTGGTCGGG
CCATTATTGGCTTGAATGATACCAGTTCAGGGCAAATTCTTTACGATGGTAAAGTAATTAATGGTAGAAAATCCAAATCA
GATGCCAATGAGCTGATACGTAAAATTCAAATGATTTTCCAAGATCCTGCTGCTAGTTTAAATGAACGTGCAACTGTTGA
TTATATCATTTCGGAAGGTCTCTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGACGATGA
TGACTGAAGTTGGCCTGCTGTCAGAGCATCTGACTCGCTACCCACATGAATTTTCGGGAGGTCAACGCCAGCGGATTGGT
ATTGCCAGAGCCTTAGTGATGAATCCTGAATTCGTTATTGCTGATGAGCCTATCTCAGCTTTAGATGTCTCTGTTCGAGC
ACAAGTCCTAAATCTTCTTAAAAGAATGCAGGCAGAAAAAGGGCTCACTTATCTTTTCATCGCCCATGACCTTTCCGTTG
TTCGATTCATTTCAGATCGTATTGCGGTTATTCATAAAGGGGTTATTGTGGAGGTTGCAGAAACAGAAGAATTATTTAAT
AATCCTATCCATCCTTACACAAAATCTCTGCTGTCAGCCGTTCCTATTCCTGATCCGATTTTAGAACGTCAAAAAGAACT
TGTTGTTTATAATCCAGATCAGCATGATTATACCGTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTAAAAAGTATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.353	99.674	0.821
amiF	Streptococcus thermophilus LMD-9	82.026	99.674	0.818
amiF	Streptococcus salivarius strain HSISS4	82.026	99.674	0.818