Detailed information NTG0647789

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: OHN75_RS11860
• Genome accession: NZ_CP107879
• Coordinates: 2601942..2603309 (-)
• Length: 455 a.a.
• NCBI ID: WP_327664297.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00484
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2596942..2608309

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHN75_RS11840 (OHN75_11845)	-	2597660..2598028 (-)	369	WP_266721779.1	DUF6167 family protein	-
OHN75_RS11845 (OHN75_11850)	-	2598037..2598483 (-)	447	WP_327669682.1	DUF948 domain-containing protein	-
OHN75_RS11850 (OHN75_11855)	-	2598669..2600912 (+)	2244	WP_327669683.1	AAA family ATPase	-
OHN75_RS11855 (OHN75_11860)	rpsD	2600967..2601581 (-)	615	WP_327664298.1	30S ribosomal protein S4	-
OHN75_RS11860 (OHN75_11865)	rarA	2601942..2603309 (-)	1368	WP_327664297.1	replication-associated recombination protein A	Machinery gene
OHN75_RS11865 (OHN75_11870)	-	2603359..2604000 (-)	642	WP_266721769.1	vitamin K epoxide reductase family protein	-
OHN75_RS11870 (OHN75_11875)	hisS	2604178..2605440 (-)	1263	WP_327669684.1	histidine--tRNA ligase	-
OHN75_RS11875 (OHN75_11880)	-	2605454..2606164 (-)	711	WP_327669685.1	MBL fold metallo-hydrolase	-
OHN75_RS11880 (OHN75_11885)	-	2606306..2607085 (+)	780	WP_327664293.1	peptidylprolyl isomerase	-

Sequence

Protein

• Length: 455 a.a.
• Molecular weight: 48063.35 Da
• Isoelectric Point: 5.6499

>NTDB_id=647789 OHN75_RS11860 WP_327664297.1 2601942..2603309(-) (rarA) [Streptomyces sp. NBC_00484]
MEADLFTAAAEERQEKDPSASPLAVRMRPRVLDEVVGQQHLLKQGSPLRRLVGDGGSGPAGASSVILWGPPGIGKTTLAY
VVSKATNKRFVELSAITAGVKEVRAVIEGARRALGAHGKDTVLFLDEIHRFSKAQQDSLLPAVENRWVTLIAATTENPYF
SVISPLLSRSLLLTLESLTDDDLRGLLARALTEERGLDGAVTLAEDAEEHILRVAGGDARRALTALEAAAGAAIAKGEET
ITLESVEESVNRAAVTYDRDGDQHYDVASALIKSIRGSDVDAALHYLARMIEAGEDPRFIARRLMISASEDIGLADPTAL
PTAVAAAQAVAMIGFPEAALTLSHATIALALAPKSNAATTAIGAAMEDVRKGLAGPVPPHLRDGHYKGAAKLGHAQGYVY
PHDVPGGIAAQQYAPDAIAGRRYYQPTRYGAEARYADVVERVRERLGGPGGEGSD

Nucleotide

• Length: 1368 bp

>NTDB_id=647789 OHN75_RS11860 WP_327664297.1 2601942..2603309(-) (rarA) [Streptomyces sp. NBC_00484]
GTGGAAGCCGACCTGTTCACCGCCGCAGCCGAAGAGCGCCAGGAGAAGGACCCGTCCGCGAGCCCCCTGGCCGTCCGGAT
GCGCCCGCGCGTCCTCGACGAGGTCGTCGGCCAGCAGCACCTGCTCAAGCAGGGCTCGCCGCTGCGCCGACTGGTCGGCG
ACGGCGGGTCAGGACCCGCGGGCGCCTCCTCGGTGATCCTCTGGGGCCCGCCCGGCATCGGCAAGACCACGCTGGCGTAT
GTGGTGTCCAAGGCGACGAACAAGCGGTTCGTGGAGCTGTCCGCGATCACCGCGGGCGTCAAGGAAGTGCGCGCCGTCAT
CGAGGGCGCCCGCCGCGCGCTGGGCGCCCACGGCAAGGACACGGTGCTCTTCCTCGACGAGATCCACCGCTTCAGCAAGG
CCCAGCAGGACTCGCTGCTGCCCGCCGTCGAGAACCGCTGGGTGACGCTGATCGCGGCGACGACGGAGAACCCGTACTTC
TCGGTGATCTCCCCGCTGCTGTCCCGCTCCCTGCTGCTCACCCTCGAATCGCTCACCGACGACGACCTGCGCGGACTGCT
CGCGCGTGCGCTCACCGAGGAGCGCGGTCTCGACGGCGCGGTGACGCTCGCCGAGGACGCCGAGGAGCACATCCTGCGGG
TGGCCGGCGGCGACGCCCGGCGCGCGCTCACCGCCCTGGAGGCGGCGGCCGGAGCGGCCATCGCCAAGGGCGAGGAGACC
ATCACCCTCGAAAGCGTCGAGGAGTCGGTGAACCGCGCGGCGGTGACCTACGACCGGGACGGGGACCAGCACTACGACGT
GGCGAGCGCCCTCATCAAGTCCATCCGCGGCTCGGACGTGGACGCGGCGCTGCACTACCTGGCCCGCATGATCGAGGCCG
GCGAGGACCCCCGCTTCATCGCCCGCCGCCTGATGATCTCCGCGAGCGAGGACATCGGCCTCGCGGACCCGACGGCGCTG
CCGACCGCCGTGGCCGCCGCCCAGGCCGTCGCGATGATCGGCTTCCCGGAGGCGGCGCTCACCCTGAGCCACGCGACGAT
CGCCCTCGCCCTGGCCCCGAAGTCGAACGCGGCGACGACGGCGATCGGCGCCGCCATGGAGGACGTACGCAAGGGCCTGG
CAGGCCCCGTGCCGCCGCACCTGCGCGACGGGCACTACAAGGGCGCCGCCAAGCTGGGCCACGCGCAGGGCTATGTGTAT
CCGCACGATGTGCCCGGCGGTATCGCGGCCCAGCAGTACGCGCCGGACGCGATAGCGGGCCGCCGCTACTACCAGCCGAC
GCGCTACGGGGCGGAGGCCCGGTACGCGGACGTGGTAGAGCGGGTCCGCGAGCGGCTCGGGGGCCCTGGCGGCGAGGGGT
CCGACTGA

Domains

Predicted by InterProScan.

• AAA C-terminal domain (AAA_assoc_2) (199-276)

• MgsA AAA+ ATPase C terminal (MgsA_C) (277-442)

• ATPase family associated with various cellular activities (AAA) (AAA) (65-169)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	44.186	94.505	0.418