Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   SCAZ3_RS04455 Genome accession   NZ_AIDX01000001
Coordinates   967726..968493 (+) Length   255 a.a.
NCBI ID   WP_003045869.1    Uniprot ID   -
Organism   Streptococcus canis FSL Z3-227     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 962726..973493
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS04425 (SCAZ3_11500) yaaA 962951..963364 (-) 414 WP_003045861.1 S4 domain-containing protein YaaA -
  SCAZ3_RS04430 - 963444..964344 (-) 901 Protein_890 IS30 family transposase -
  SCAZ3_RS11595 - 964570..965394 (-) 825 Protein_891 DDE-type integrase/transposase/recombinase -
  SCAZ3_RS04445 (SCAZ3_11525) rlmH 965714..966193 (-) 480 WP_003045866.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SCAZ3_RS04450 (SCAZ3_11530) htrA 966406..967629 (+) 1224 WP_003045868.1 S1C family serine protease Regulator
  SCAZ3_RS04455 (SCAZ3_11535) spo0J 967726..968493 (+) 768 WP_003045869.1 ParB/RepB/Spo0J family partition protein Regulator
  SCAZ3_RS04460 (SCAZ3_00010) dnaA 968727..970082 (+) 1356 WP_003043737.1 chromosomal replication initiator protein DnaA -
  SCAZ3_RS04465 (SCAZ3_00015) dnaN 970236..971372 (+) 1137 WP_003043739.1 DNA polymerase III subunit beta -
  SCAZ3_RS04470 (SCAZ3_00020) - 971445..971636 (+) 192 WP_003043741.1 DUF951 domain-containing protein -
  SCAZ3_RS04475 (SCAZ3_00025) - 971764..972162 (+) 399 WP_003043743.1 helix-turn-helix domain-containing protein -
  SCAZ3_RS04480 (SCAZ3_00030) ychF 972258..973373 (+) 1116 WP_003043745.1 redox-regulated ATPase YchF -

Sequence

Protein


Download         Length: 255 a.a.        Molecular weight: 28706.40 Da        Isoelectric Point: 9.9893

>NTDB_id=64772 SCAZ3_RS04455 WP_003045869.1 967726..968493(+) (spo0J) [Streptococcus canis FSL Z3-227]
MTELLIQIPIEDIVANPYQPRLQFNQKELEDLARSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKIAGLTKVPAIVK
TISALESMQQAIVENLQRADLNAIEEAKAYQLLIDKNKMTHEEVAKYMGKSRPYISNTLRLLQLPDSIQRAVENGDISAG
HARALLAFSNEKEQLLYATKIKNEGMSVRQIEQLVTPKPKKSKNDKDIFVTSLEKQLAKSLGLKATIKLISHQTGHLQLP
FANEDELNRIINKLL

Nucleotide


Download         Length: 768 bp        

>NTDB_id=64772 SCAZ3_RS04455 WP_003045869.1 967726..968493(+) (spo0J) [Streptococcus canis FSL Z3-227]
ATGACAGAATTATTGATACAAATTCCCATTGAAGATATTGTGGCAAATCCCTATCAGCCAAGACTTCAATTTAATCAAAA
AGAGCTTGAAGACTTAGCAAGGTCAATCAAAGCAAATGGACTTATTCAACCTATTATCGTTCGAAAATCTGATATTTTTG
GTTATGAACTAGTCGCTGGAGAACGACGATTTAAAGCTTCAAAAATAGCAGGACTAACCAAAGTACCAGCTATTGTCAAA
ACAATATCAGCACTTGAAAGCATGCAACAAGCCATTGTTGAAAATTTACAACGAGCTGACCTAAATGCCATCGAAGAAGC
CAAAGCCTACCAGTTACTTATTGACAAAAATAAGATGACTCATGAAGAGGTTGCCAAATATATGGGGAAATCCAGACCCT
ATATTAGCAATACCTTGCGCTTGTTACAACTACCAGATTCTATCCAGAGAGCCGTAGAAAATGGGGACATTAGTGCTGGT
CACGCGCGAGCCTTATTGGCTTTTTCTAATGAAAAAGAACAATTACTATATGCCACTAAAATCAAAAATGAAGGCATGAG
TGTTCGACAAATTGAACAATTGGTTACTCCGAAACCAAAAAAATCAAAAAATGACAAGGATATTTTTGTCACTTCTTTAG
AAAAACAACTCGCCAAATCTCTTGGCTTAAAAGCAACTATTAAGTTGATATCACATCAGACTGGCCACTTGCAATTACCT
TTTGCTAATGAAGATGAACTAAACAGAATTATCAACAAGTTACTTTAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-195)

ParB/Sulfiredoxin domain (ParB_N)

(7-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

100

0.576

Multiple sequence alignment