Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   L1881_RS03970 Genome accession   NZ_CP091100
Coordinates   811973..813241 (-) Length   422 a.a.
NCBI ID   WP_002326916.1    Uniprot ID   -
Organism   Enterococcus faecium strain P47     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 806973..818241
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1881_RS03965 (L1881_03965) - 810196..811905 (-) 1710 WP_002319368.1 proline--tRNA ligase -
  L1881_RS03970 (L1881_03970) eeP 811973..813241 (-) 1269 WP_002326916.1 RIP metalloprotease RseP Regulator
  L1881_RS03975 (L1881_03975) - 813402..814202 (-) 801 WP_002296531.1 phosphatidate cytidylyltransferase -
  L1881_RS03980 (L1881_03980) - 814199..815011 (-) 813 WP_002294134.1 isoprenyl transferase -
  L1881_RS03985 (L1881_03985) frr 815206..815763 (-) 558 WP_002293875.1 ribosome recycling factor -
  L1881_RS03990 (L1881_03990) pyrH 815766..816488 (-) 723 WP_002293877.1 UMP kinase -
  L1881_RS03995 (L1881_03995) tsf 816624..817505 (-) 882 WP_002293878.1 translation elongation factor Ts -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46090.54 Da        Isoelectric Point: 4.8405

>NTDB_id=647681 L1881_RS03970 WP_002326916.1 811973..813241(-) (eeP) [Enterococcus faecium strain P47]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAILLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVITKNPGKTLDFKIEREGQVQSVDVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=647681 L1881_RS03970 WP_002326916.1 811973..813241(-) (eeP) [Enterococcus faecium strain P47]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CCTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTACGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(199-270)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.439

100

0.552
  eeP Streptococcus thermophilus LMG 18311

54.206

100

0.55