Detailed information NTG0647663

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG250_RS28900
• Genome accession: NZ_CP107877
• Coordinates: 6686793..6688079 (+)
• Length: 428 a.a.
• NCBI ID: WP_005479362.1
• Uniprot ID: A0A8I0P6X2
• Organism: Streptomyces sp. NBC_00487
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6681793..6693079

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG250_RS28870 (OG250_28920)	-	6682540..6682734 (+)	195	WP_033526477.1	hypothetical protein	-
OG250_RS28885 (OG250_28935)	tig	6683362..6684753 (+)	1392	WP_326582803.1	trigger factor	-
OG250_RS28890 (OG250_28940)	clpP	6685158..6685766 (+)	609	WP_189709844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG250_RS28895 (OG250_28945)	clpP	6685909..6686589 (+)	681	WP_326582804.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG250_RS28900 (OG250_28950)	clpX	6686793..6688079 (+)	1287	WP_005479362.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG250_RS28905 (OG250_28955)	-	6688245..6689195 (-)	951	WP_327729709.1	hypothetical protein	-
OG250_RS28910 (OG250_28960)	-	6689333..6691963 (+)	2631	WP_327729710.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46886.74 Da
• Isoelectric Point: 4.8317

>NTDB_id=647663 OG250_RS28900 WP_005479362.1 6686793..6688079(+) (clpX) [Streptomyces sp. NBC_00487]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIN
ADVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=647663 OG250_RS28900 WP_005479362.1 6686793..6688079(+) (clpX) [Streptomyces sp. NBC_00487]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCG
GCCAAGAAAGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGAAAGAGCGAGAACCCCTCGATCACGCGCGACGTGTCGGGTGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAAGGCACCACGGCGTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGAGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAACTCGAATCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCATCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTGATGTCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCAAC
GCCGACGTGGTCCGCTCCAACGTCAACCCGACCCTGATTCCGCGGGACGCCCGCGGCCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A8I0P6X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521