Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   SCAZ3_RS02220 Genome accession   NZ_AIDX01000001
Coordinates   482848..483573 (-) Length   241 a.a.
NCBI ID   WP_003044963.1    Uniprot ID   A0A2D4DM13
Organism   Streptococcus canis FSL Z3-227     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 477848..488573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS02185 (SCAZ3_09200) rnpM 477890..478186 (-) 297 WP_003044945.1 RNase P modulator RnpM -
  SCAZ3_RS02190 (SCAZ3_09205) nusA 478202..479359 (-) 1158 WP_003044948.1 transcription termination factor NusA -
  SCAZ3_RS02195 (SCAZ3_09210) rimP 479530..480012 (-) 483 WP_051026415.1 ribosome maturation factor RimP -
  SCAZ3_RS02205 (SCAZ3_09215) trmB 480330..480965 (-) 636 WP_003044953.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  SCAZ3_RS02210 (SCAZ3_09220) ccrZ 480965..481756 (-) 792 WP_003044956.1 cell cycle regulator CcrZ -
  SCAZ3_RS02215 (SCAZ3_09225) - 481811..482845 (-) 1035 WP_003044958.1 ABC transporter permease -
  SCAZ3_RS02220 (SCAZ3_09230) pptA 482848..483573 (-) 726 WP_003044963.1 ABC transporter ATP-binding protein Regulator
  SCAZ3_RS02225 (SCAZ3_09235) - 483645..484064 (+) 420 WP_003044965.1 HIT family protein -
  SCAZ3_RS02230 (SCAZ3_09240) - 484061..484378 (+) 318 WP_003044966.1 hypothetical protein -
  SCAZ3_RS02235 (SCAZ3_09245) brpA 484427..485698 (-) 1272 WP_003044969.1 biofilm formation/cell division transcriptional regulator BrpA -
  SCAZ3_RS02240 (SCAZ3_09250) - 485707..486231 (-) 525 WP_003044971.1 GNAT family N-acetyltransferase -
  SCAZ3_RS02245 (SCAZ3_09255) tsaE 486224..486667 (-) 444 WP_039994873.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  SCAZ3_RS02250 (SCAZ3_09260) - 486854..488314 (-) 1461 WP_003044979.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26543.88 Da        Isoelectric Point: 4.8524

>NTDB_id=64762 SCAZ3_RS02220 WP_003044963.1 482848..483573(-) (pptA) [Streptococcus canis FSL Z3-227]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYKGEISIDGLTLAENPADYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAKPFLDMFRLTDKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIKTLEIEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLAELQATFGDPSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=64762 SCAZ3_RS02220 WP_003044963.1 482848..483573(-) (pptA) [Streptococcus canis FSL Z3-227]
ATGTTAAACATTGAAAATCTAACGGGAGGCTACCTTAATATTCCCGTTTTAAAAGAGGTTTCATTTTCTGTTGGCAATGG
AGAATTGGTCGGTTTGATTGGCTTAAATGGAGCTGGAAAGTCAACGACCATCAATGAAATTATTGGTTTTTTAAAACCCT
ACAAGGGAGAAATCTCCATTGACGGCCTTACGCTTGCTGAAAATCCAGCAGACTACCGTAAAAAAATTGGTTTTATCCCA
GAAACTCCTAGTCTCTACGAAGAATTAACCTTAGCAGAGCATATTAATACTGTGGCTATGGCTTATGATATTGATGTGGA
GCTGGCCCAGAAACGGGCAAAGCCTTTTTTAGACATGTTTCGCTTGACAGATAAACTCGACTGGTTTCCTGTGCATTTTT
CAAAGGGCATGAAGCAAAAAGTCATGATTATTTGTGCTTTTGTGATTGATCCCAGCTTGTTTATTCTTGATGAGCCATTT
TTAGGGTTAGATCCACTAGCTATTTCGGACTTGATTAAGACTTTAGAGATTGAAAAAGCCAAAGGCAAATCTATTTTAAT
GAGTACTCACGTGCTAGACTCTGCTGAAAAAATGTGTGATCGTTTTGTGATTTTGCACCATGGTCAGGTGCGTGCTCAAG
GAACTCTTGCTGAGTTACAAGCGACCTTTGGAGATCCTTCGGCTAGCTTAAACGATATTTATTTGGCATTGACAAAAGAG
GGCTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DM13

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743

Multiple sequence alignment