Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG381_RS26375 Genome accession   NZ_CP107869
Coordinates   5794189..5795313 (-) Length   374 a.a.
NCBI ID   WP_327718549.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00490     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 5789189..5800313
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG381_RS26350 (OG381_26360) cseB 5789649..5790353 (-) 705 WP_307027614.1 two-component system response regulator CseB -
  OG381_RS26355 (OG381_26365) - 5790467..5791195 (-) 729 WP_327718546.1 hypothetical protein -
  OG381_RS26360 (OG381_26370) - 5791180..5791722 (-) 543 WP_046263315.1 SigE family RNA polymerase sigma factor -
  OG381_RS26365 (OG381_26375) - 5791961..5792896 (-) 936 WP_327718547.1 A/G-specific adenine glycosylase -
  OG381_RS26370 (OG381_26380) - 5793251..5794084 (+) 834 WP_327718548.1 hypothetical protein -
  OG381_RS26375 (OG381_26385) disA 5794189..5795313 (-) 1125 WP_327718549.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG381_RS26380 (OG381_26390) radA/sms 5795395..5796804 (-) 1410 WP_327718550.1 DNA repair protein RadA Machinery gene
  OG381_RS26385 (OG381_26395) - 5797003..5798685 (+) 1683 WP_327718551.1 hypothetical protein -
  OG381_RS26390 (OG381_26400) - 5798694..5799545 (-) 852 WP_327718552.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40176.92 Da        Isoelectric Point: 5.0025

>NTDB_id=647561 OG381_RS26375 WP_327718549.1 5794189..5795313(-) (disA) [Streptomyces sp. NBC_00490]
MAANDRAAAPGKSGGSSGAEGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGFDKTVEPMCTGGFVLDVEFTATRLR
ELCKLDGGIVISTDGSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFPVVSVSQSMRLIALYVNGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVLELGTDGRLLSLQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALYELNALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=647561 OG381_RS26375 WP_327718549.1 5794189..5795313(-) (disA) [Streptomyces sp. NBC_00490]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGAGGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGCCTCGAGCGGATTCTCCGCGGCAACACGGGCGGACTCATCGTGC
TCGGTTTCGACAAGACCGTCGAGCCGATGTGCACGGGCGGTTTCGTCCTGGACGTCGAGTTCACCGCCACGCGTCTGCGT
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCTCCACGGACGGATCGAAGATCCTGCGGGCGGGTGTGCAGCTGGTGCC
CGATCCGACGATCCCCACGGAGGAGACGGGCACGCGCCACCGCACGGCGGACCGTGTCTCCAAGCAGGTCGACTTCCCCG
TGGTGTCGGTCTCCCAGTCCATGCGTCTGATCGCGCTCTACGTCAACGGCCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCCCTGGCGACCCTGGAGCGCTACAAGCTCCGCCTGGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTGACGGTCCGGGACGTGTCGGCGGTGGCGCAACGGCTGGAGATGGTCCGCCGTATCG
CGACGGAGATCGCCGAGTACGTGCTCGAACTCGGCACGGACGGACGTCTCCTCTCCCTCCAGCTCGACGAGTTGATCGCC
GGCGTGGAGCCCGAGCGCGAGCTGGTGGTCCGGGACTACGTCCCCGAGCCCACGGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTGTACGAGCTCAACGCCCTCAGCCACGCCGAGCTCCTCGAACTGTCCACGGTGGCACGCGCGTTGGGCTACACCG
GCTCTCCGGAGGCGCTGGACTCGGCGGTCTCGCCGCGAGGCTTCCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGCGCG
ATCATCGACCGCCTGGTGGAACACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGGGTCGGCGAGGCGCGGGCACGCAGCGTACGAGAGGGCCTGTCGCGGTTGGCGGAGAGCTCGATCCTGGAACGGTACG
TGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.821

92.513

0.433