Detailed information NTG0647384

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG561_RS28870
• Genome accession: NZ_CP107865
• Coordinates: 6686892..6688178 (+)
• Length: 428 a.a.
• NCBI ID: WP_005479362.1
• Uniprot ID: A0A8I0P6X2
• Organism: Streptomyces sp. NBC_00496
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6681892..6693178

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG561_RS28840 (OG561_28895)	-	6682639..6682833 (+)	195	WP_033526477.1	hypothetical protein	-
OG561_RS28855 (OG561_28910)	tig	6683461..6684852 (+)	1392	WP_326582803.1	trigger factor	-
OG561_RS28860 (OG561_28915)	clpP	6685257..6685865 (+)	609	WP_189709844.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG561_RS28865 (OG561_28920)	clpP	6686008..6686688 (+)	681	WP_326582804.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG561_RS28870 (OG561_28925)	clpX	6686892..6688178 (+)	1287	WP_005479362.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG561_RS28875 (OG561_28930)	-	6688344..6689294 (-)	951	WP_327729709.1	hypothetical protein	-
OG561_RS28880 (OG561_28935)	-	6689432..6692062 (+)	2631	WP_327729710.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46886.74 Da
• Isoelectric Point: 4.8317

>NTDB_id=647384 OG561_RS28870 WP_005479362.1 6686892..6688178(+) (clpX) [Streptomyces sp. NBC_00496]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIN
ADVVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=647384 OG561_RS28870 WP_005479362.1 6686892..6688178(+) (clpX) [Streptomyces sp. NBC_00496]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCG
GCCAAGAAAGCCCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGTCCCACGGGCTCCGGCAAGACCCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGAAAGAGCGAGAACCCCTCGATCACGCGCGACGTGTCGGGTGAGGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAAGGCACCACGGCGTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGAGGGCGGGAGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGCGAACTCGAATCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCATCGAGCCCCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTGATGTCGGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCAAC
GCCGACGTGGTCCGCTCCAACGTCAACCCGACCCTGATTCCGCGGGACGCCCGCGGCCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A8I0P6X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521