Detailed information NTG0647304

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA47_RS29710
• Genome accession: NZ_CP107862
• Coordinates: 6554372..6555658 (+)
• Length: 428 a.a.
• NCBI ID: WP_266719660.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00498
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6549372..6560658

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA47_RS29680 (OHA47_29675)	-	6550408..6550602 (+)	195	WP_255971564.1	hypothetical protein	-
OHA47_RS29695 (OHA47_29690)	tig	6551130..6552512 (+)	1383	WP_327663367.1	trigger factor	-
OHA47_RS29700 (OHA47_29695)	clpP	6552890..6553495 (+)	606	WP_266725478.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA47_RS29705 (OHA47_29700)	clpP	6553557..6554216 (+)	660	WP_266719658.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA47_RS29710 (OHA47_29705)	clpX	6554372..6555658 (+)	1287	WP_266719660.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA47_RS29715 (OHA47_29710)	-	6555774..6556823 (-)	1050	WP_327663368.1	hypothetical protein	-
OHA47_RS29720 (OHA47_29715)	-	6556939..6559590 (+)	2652	WP_327663369.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46714.35 Da
• Isoelectric Point: 4.6988

>NTDB_id=647304 OHA47_RS29710 WP_266719660.1 6554372..6555658(+) (clpX) [Streptomyces sp. NBC_00498]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTSASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATLHSKRELDEKDQFQEVMPEDLVKFGMIPEFIGRLPVITAVQNLDR
EALLQILVEPKNALVKQYERLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDARGGGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=647304 OHA47_RS29710 WP_266719660.1 6554372..6555658(+) (clpX) [Streptomyces sp. NBC_00498]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAAGTGCGCTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGAGCTACGTCGTAGGACAGGAAGCC
GCAAAGAAGGCCCTGTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGGGCGAACGGGCG
GGACGACGCGATCGAACTCGCGAAGTCCAACATCCTTCTCCTCGGCCCGACCGGCTCCGGCAAGACGCTCCTCGCACAGA
CGCTGGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAAACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGTCGGAGAACCCGTCGATCACGCGTGACGTGAGCGGTGAGGGCGTACAGCAGGCGC
TCCTCAAGATCCTTGAGGGGACCAGCGCCTCGGTTCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTCGAGAAGATCATCGAGTCGCGCGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACCCTGCACTCCAAGCGCGAGCTCGACGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCGCGGTCCAGAACCTCGACCGT
GAGGCGCTGCTCCAGATCCTCGTCGAGCCGAAGAACGCGCTGGTCAAGCAGTACGAGCGGCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCGATCCTGCGCCGCACCGGCGCGCGAGGGCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCGGAAGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGACGCCCGCGGTGGCGGCAGCGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	93.925	0.603
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521