Detailed information    

insolico Bioinformatically predicted

Overview

Name   disA   Type   Machinery gene
Locus tag   OHA47_RS26215 Genome accession   NZ_CP107862
Coordinates   5747094..5748218 (-) Length   374 a.a.
NCBI ID   WP_266711290.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00498     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 5742094..5753218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA47_RS26195 (OHA47_26200) - 5742990..5744588 (+) 1599 WP_327662848.1 histidine kinase -
  OHA47_RS26200 (OHA47_26205) - 5744576..5745259 (+) 684 WP_327662849.1 response regulator transcription factor -
  OHA47_RS26205 (OHA47_26210) - 5745338..5746003 (-) 666 WP_327662850.1 phosphatase PAP2 family protein -
  OHA47_RS26210 (OHA47_26215) - 5746190..5747017 (+) 828 WP_327662851.1 hypothetical protein -
  OHA47_RS26215 (OHA47_26220) disA 5747094..5748218 (-) 1125 WP_266711290.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA47_RS26220 (OHA47_26225) radA/sms 5748311..5749717 (-) 1407 WP_266711289.1 DNA repair protein RadA Machinery gene
  OHA47_RS26225 (OHA47_26230) - 5749968..5751680 (+) 1713 WP_327662852.1 hypothetical protein -
  OHA47_RS26230 (OHA47_26235) - 5751711..5752592 (-) 882 WP_327662853.1 hypothetical protein -

Sequence

Protein


Download         Length: 374 a.a.        Molecular weight: 40051.83 Da        Isoelectric Point: 4.9989

>NTDB_id=647296 OHA47_RS26215 WP_266711290.1 5747094..5748218(-) (disA) [Streptomyces sp. NBC_00498]
MAANDRAATPGKSGGSSGADSLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVESMCTGGFILDVEFTATRLR
ELCKLDGGIVVSSNLDKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGYTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVARDYVPEPTAKRSRTVPEALVELDALSHAELLELPIVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=647296 OHA47_RS26215 WP_266711290.1 5747094..5748218(-) (disA) [Streptomyces sp. NBC_00498]
GTGGCAGCCAATGACCGGGCGGCAACTCCCGGCAAGTCCGGCGGAAGCTCCGGTGCGGACAGTCTGATGCGCGCCGCGCT
GAGTGCCGTCGCGCCCGGAACCGCCCTGCGCGACGGCCTGGAGCGCATCCTCCGCGGCAACACCGGAGGACTCATCGTCC
TCGGCTCCGACAAGACGGTCGAGTCGATGTGCACGGGCGGCTTCATCCTCGACGTGGAGTTCACGGCCACGCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGGTCTCCTCGAACCTCGACAAGATCCTGCGGGCCGGCGTCCAGTTGGTGCC
GGACCCCACGATCCCCACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCCAAGCAGGTCGGCTACACCG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTGGACGGGCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGTGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAGCTGCGCCTCGACGAGGTGGCGGGCACGCTCTC
CGCCCTGGAGATCGAGGACCTGGTCACGGTCCGGGACGTCTCGGCGGTCGCGCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACGGAGATCGCCGAGTACGTCGTCGAGTTGGGCACGGACGGCCGGCTTCTGGCGCTGCAGCTCGACGAGTTGATCGCG
GGCGTCGAGCCGGAGCGCGAACTGGTCGCGCGGGACTACGTGCCCGAGCCCACCGCCAAGCGTTCCCGCACGGTCCCGGA
GGCGCTGGTCGAGCTGGACGCGCTCAGCCACGCGGAACTGCTCGAACTGCCGATAGTGGCACGGGCACTGGGCTACACCG
GCTCCCCCGAGGCACTCGACTCGGCGGTGTCCCCGCGCGGCTTCCGGCTCCTGGCCAAGGTGCCGCGCCTCCCTGGCGCC
ATCATCGACCGCCTCGTGGAGCACTTCGGCGGCCTGCAGAAGTTGCTGGCCGCGAGTGTGGACGACCTTCAGACGGTCGA
CGGGGTCGGAGAGGCGCGGGCGCGGAGCGTGCGGGAGGGCCTGTCGCGGTTGGCGGAGTCGTCGATCCTCGAGCGGTACG
TATAG

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_2)

(324-359)

DisA bacterial checkpoint controller linker region (DisA-linker)

(155-297)

DisA bacterial checkpoint controller nucleotide-binding (DAC)

(38-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.856

96.791

0.444