Detailed information NTG0647199

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHP34_RS29730
• Genome accession: NZ_CP107861
• Coordinates: 6556320..6557606 (+)
• Length: 428 a.a.
• NCBI ID: WP_266719660.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00499
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6551320..6562606

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHP34_RS29700 (OHP34_29700)	-	6552356..6552550 (+)	195	WP_255971564.1	hypothetical protein	-
OHP34_RS29715 (OHP34_29715)	tig	6553078..6554460 (+)	1383	WP_327663367.1	trigger factor	-
OHP34_RS29720 (OHP34_29720)	clpP	6554838..6555443 (+)	606	WP_266725478.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHP34_RS29725 (OHP34_29725)	clpP	6555505..6556164 (+)	660	WP_266719658.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHP34_RS29730 (OHP34_29730)	clpX	6556320..6557606 (+)	1287	WP_266719660.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHP34_RS29735 (OHP34_29735)	-	6557722..6558771 (-)	1050	WP_327663368.1	hypothetical protein	-
OHP34_RS29740 (OHP34_29740)	-	6558887..6561538 (+)	2652	WP_327663369.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46714.35 Da
• Isoelectric Point: 4.6988

>NTDB_id=647199 OHP34_RS29730 WP_266719660.1 6556320..6557606(+) (clpX) [Streptomyces sp. NBC_00499]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEA
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTSASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATLHSKRELDEKDQFQEVMPEDLVKFGMIPEFIGRLPVITAVQNLDR
EALLQILVEPKNALVKQYERLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDARGGGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=647199 OHP34_RS29730 WP_266719660.1 6556320..6557606(+) (clpX) [Streptomyces sp. NBC_00499]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGTCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAAGTGCGCTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGAGCTACGTCGTAGGACAGGAAGCC
GCAAAGAAGGCCCTGTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGGGCGAACGGGCG
GGACGACGCGATCGAACTCGCGAAGTCCAACATCCTTCTCCTCGGCCCGACCGGCTCCGGCAAGACGCTCCTCGCACAGA
CGCTGGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATTCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAAACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGTCGGAGAACCCGTCGATCACGCGTGACGTGAGCGGTGAGGGCGTACAGCAGGCGC
TCCTCAAGATCCTTGAGGGGACCAGCGCCTCGGTTCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTCGAGAAGATCATCGAGTCGCGCGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACCCTGCACTCCAAGCGCGAGCTCGACGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTCATCACCGCGGTCCAGAACCTCGACCGT
GAGGCGCTGCTCCAGATCCTCGTCGAGCCGAAGAACGCGCTGGTCAAGCAGTACGAGCGGCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCGATCCTGCGCCGCACCGGCGCGCGAGGGCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCGGAAGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCGCGGGACGCCCGCGGTGGCGGCAGCGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	93.925	0.603
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521