Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHQ36_RS28040 Genome accession   NZ_CP107860
Coordinates   6224114..6225238 (-) Length   374 a.a.
NCBI ID   WP_330306439.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00500     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 6219114..6230238
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHQ36_RS28015 (OHQ36_28030) cseB 6219684..6220391 (-) 708 WP_330306435.1 two-component system response regulator CseB -
  OHQ36_RS28020 (OHQ36_28035) - 6220411..6221058 (-) 648 WP_330306436.1 hypothetical protein -
  OHQ36_RS28025 (OHQ36_28040) - 6221046..6221597 (-) 552 WP_327430645.1 SigE family RNA polymerase sigma factor -
  OHQ36_RS28030 (OHQ36_28045) - 6221896..6222804 (-) 909 WP_330306437.1 A/G-specific adenine glycosylase -
  OHQ36_RS28035 (OHQ36_28050) - 6223118..6223927 (+) 810 WP_330306438.1 hypothetical protein -
  OHQ36_RS28040 (OHQ36_28055) disA 6224114..6225238 (-) 1125 WP_330306439.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHQ36_RS28045 (OHQ36_28060) radA/sms 6225307..6226716 (-) 1410 WP_327430649.1 DNA repair protein RadA Machinery gene
  OHQ36_RS28050 (OHQ36_28065) - 6226916..6228691 (+) 1776 WP_406501897.1 BACON domain-containing protein -
  OHQ36_RS28055 (OHQ36_28070) - 6228755..6229615 (-) 861 WP_330306441.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40154.91 Da        Isoelectric Point: 4.9269

>NTDB_id=647088 OHQ36_RS28040 WP_330306439.1 6224114..6225238(-) (disA) [Streptomyces sp. NBC_00500]
MAANDRAAAPGKSGGSSGADGLMRASLSAVAPGTALRDGLERILRGNTGGLIVLGWDKTVESMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVSFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELDALSHAELLELSTVARALGYTGSPEALDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQAVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=647088 OHQ36_RS28040 WP_330306439.1 6224114..6225238(-) (disA) [Streptomyces sp. NBC_00500]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAATCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCTCACT
GAGCGCCGTGGCACCAGGCACAGCCCTGCGCGACGGGCTCGAGCGTATTCTCCGCGGCAACACCGGCGGACTCATCGTGC
TCGGCTGGGACAAGACCGTCGAGTCGATGTGCACCGGCGGTTTCGTGCTGGACGTCGAGTTCACCGCGACCCGCCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTCATCGACAAGGACATCACCAAGATCCTGCGCGCGGGCGTGCAGCTGGTGCC
CGACCCCACGATCCCCACCGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCAGCTTCCCGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTCTCCCGCGCCAACCAGGCCCTCGCGACCCTGGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGAACGTTGTC
AGCGCTGGAGATCGAGGACCTCGTCACCGTCCGCGACGTCTCGGCTGTCGCCCAGCGCCTGGAGATGGTGCGGCGCATCG
CCACCGAGATCGCCGAGTACGTAGTCGAACTGGGCACCGACGGGCGTCTTCTCGCCCTCCAGCTGGACGAGTTGATCGCC
GGCGTCGAGCCCGAGCGCGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCCCTCTCCGAGCTGGACGCGCTCAGCCACGCGGAGCTCCTCGAACTCTCCACCGTGGCACGGGCGCTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTTCCGCCTCCTCGCCAAGGTGCCGCGCCTGCCCGGCGCG
ATCATCGACCGCCTTGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCCAGCGTGGACGACCTGCAGGCGGTCGA
CGGGGTGGGCGAGGCGCGGGCGCGCAGTGTCCGCGAGGGGCTGTCGCGGCTGGCGGAGTCGTCGATTCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.152

96.524

0.436