Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG490_RS21295 Genome accession   NZ_CP107855
Coordinates   4583039..4584163 (-) Length   374 a.a.
NCBI ID   WP_330297894.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00503     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4578039..4589163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG490_RS21265 (OG490_21240) cseB 4578193..4578906 (-) 714 WP_330297890.1 two-component system response regulator CseB -
  OG490_RS21270 (OG490_21245) - 4578960..4579619 (-) 660 WP_330300999.1 hypothetical protein -
  OG490_RS21275 (OG490_21250) - 4579646..4580206 (-) 561 WP_069920779.1 SigE family RNA polymerase sigma factor -
  OG490_RS21280 (OG490_21255) - 4580382..4581305 (-) 924 WP_330297891.1 A/G-specific adenine glycosylase -
  OG490_RS21285 (OG490_21260) - 4581335..4581943 (-) 609 WP_330297892.1 phosphatase PAP2 family protein -
  OG490_RS21290 (OG490_21265) - 4582114..4582935 (+) 822 WP_330297893.1 hypothetical protein -
  OG490_RS21295 (OG490_21270) disA 4583039..4584163 (-) 1125 WP_330297894.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG490_RS21300 (OG490_21275) radA/sms 4584425..4585840 (-) 1416 WP_330297895.1 DNA repair protein RadA Machinery gene
  OG490_RS21305 (OG490_21280) - 4586117..4587979 (+) 1863 WP_330297896.1 hypothetical protein -
  OG490_RS21310 (OG490_21285) - 4587992..4588864 (-) 873 WP_330297897.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40330.32 Da        Isoelectric Point: 5.1222

>NTDB_id=646994 OG490_RS21295 WP_330297894.1 4583039..4584163(-) (disA) [Streptomyces sp. NBC_00503]
MAAKDGAAASGKSGASSKQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVGAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646994 OG490_RS21295 WP_330297894.1 4583039..4584163(-) (disA) [Streptomyces sp. NBC_00503]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAAGCAGGAGGCCATGATGCGTGCCTCGCT
GAGCGCGGTCGCACCCGGTCAGCCGCTGCGCGACGGCCTCGAACGGATCGTCCGCGGCAACACCGGCGGGCTCATCGTGC
TCGGCATGGACAAGTCCGTGGAAGCGATGTGCACGGGCGGTTTCGTCCTGGACGTGGAGTTCACCGCGACCCGGTTGCGC
GAGCTGTGCAAGCTCGACGGCGCGCTGATCCTGGACAAGGACCTCACCAAGATCCTGCGGGCGGGCGTGCAGCTGGTTCC
GGACGCGTCCATCCACACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGCGTCTCGAAGCAGTGCGGGTTCCCGG
TGGTCTCGGTGTCGCAGTCGATGCGGCTGATCGCGCTGTACGTGGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTCCGCCTGGACGAGGTGGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCGGCGCGGTGGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAAATCGCGGAATACGTGGTGGAACTGGGCACGGACGGCCGACTGCTCTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAGCGCGAGCTGGTCATCCGGGACTACGTGCCGGAGCCGACGGCGAAGCGGTCGCGGACGGTGGAGGA
AGCTCTGCCCGCGCTGGACGCGCTGACCCACCCGGAGCTGCTGGAACTGGCGATCGTGGCGAAGGCGCTGGGGTACACCG
GTTCGCCGGAGACGCTCGACTCGGCGGTGTCCCCGCGGGGCTACCGGCTGCTGGCGAAGGTTCCCCGGCTGCCGGGCGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGGCTGCAGAAGCTGCTGGCCGCCTCCGTGGACGACCTGCAGACGGTCGA
CGGGGTCGGCGAGGCCCGTGCCCGTAGCGTCCGCGAGGGGCTGTCGCGGCTGGCGGAATCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.983

96.524

0.444