Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHA84_RS16785 Genome accession   NZ_CP107845
Coordinates   3644204..3645328 (+) Length   374 a.a.
NCBI ID   WP_053678377.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00513     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3639204..3650328
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHA84_RS16770 (OHA84_16735) - 3639688..3640515 (+) 828 WP_053678373.1 hypothetical protein -
  OHA84_RS16775 (OHA84_16740) - 3640592..3642340 (-) 1749 WP_266971010.1 hypothetical protein -
  OHA84_RS16780 (OHA84_16745) radA/sms 3642602..3644020 (+) 1419 WP_053678501.1 DNA repair protein RadA Machinery gene
  OHA84_RS16785 (OHA84_16750) disA 3644204..3645328 (+) 1125 WP_053678377.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHA84_RS16790 (OHA84_16755) - 3645389..3646198 (-) 810 WP_053678379.1 hypothetical protein -
  OHA84_RS16795 (OHA84_16760) - 3646359..3646967 (+) 609 WP_053678502.1 phosphatase PAP2 family protein -
  OHA84_RS16800 (OHA84_16765) - 3646997..3647914 (+) 918 WP_266971006.1 A/G-specific adenine glycosylase -
  OHA84_RS16805 (OHA84_16770) - 3648135..3648695 (+) 561 WP_053678383.1 SigE family RNA polymerase sigma factor -
  OHA84_RS16810 (OHA84_16775) - 3648707..3649384 (+) 678 WP_371591398.1 hypothetical protein -
  OHA84_RS16815 (OHA84_16780) cseB 3649398..3650102 (+) 705 WP_053678385.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40415.38 Da        Isoelectric Point: 5.1189

>NTDB_id=646903 OHA84_RS16785 WP_053678377.1 3644204..3645328(+) (disA) [Streptomyces sp. NBC_00513]
MAAKDGAAASGKSGASSRQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKNVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDITKILRAGVQLVPDASIHTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALPALDALTHPELLELAIVAKALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646903 OHA84_RS16785 WP_053678377.1 3644204..3645328(+) (disA) [Streptomyces sp. NBC_00513]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGAAAGTCGGGCGCGAGCTCCAGGCAAGAGGCCATGATGCGTGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGAGAGACGGCCTGGAGAGGATCGTCCGCGGCAACACCGGTGGCCTGATCGTCC
TCGGCATGGACAAGAACGTCGAGGCGATGTGCACCGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTCATCCTGGACAAGGACATCACCAAGATCCTGCGGGCCGGCGTGCAGCTGGTCCC
GGACGCGTCCATCCACACGGAGGAGACGGGCACCCGCCACCGCACGGCCGACCGCGTCTCCAAGCAGTGCGGGTTCCCGG
TGGTGTCGGTGTCGCAGTCGATGCGGCTGATCGCGTTGTACGTGGACGGTGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCGCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTCACGGTCCGCGATGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTCCGCCGGATCG
CGACGGAGATCGCCGAGTACGTGGTCGAACTGGGCACGGACGGGCGACTGCTGTCCCTGCAACTGGACGAGTTGACGGTC
GGCATCGAGCAGGAGCGGGAGTTGGTGATCCGGGACTACGTTCCGGAACCCACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTTCCGGCGCTGGACGCGCTCACGCATCCGGAACTGCTGGAGCTGGCGATCGTGGCGAAGGCCCTGGGATACACGG
GGTCGCCGGAGACGCTGGACTCGGCGGTGTCCCCGCGGGGCTACCGGCTGCTGGCGAAGGTGCCGCGGCTGCCCGGGGCG
ATCATCGAGCGGCTGGTGGAGCACTTCGGCGGACTGCAGAAGCTGCTCGCCGCGAGCGTGGACGACCTGCAGACGGTGGA
CGGCGTGGGCGAGGCCCGGGCGCGGAGCGTCCGCGAGGGCCTGTCGCGACTGGCGGAGTCCTCGATCCTGGAGCGGTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.706

96.524

0.441