Detailed information NTG0646844

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHN73_RS30355
• Genome accession: NZ_CP107839
• Coordinates: 6535528..6536817 (+)
• Length: 429 a.a.
• NCBI ID: WP_266514322.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00519
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6530528..6541817

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHN73_RS30325 (OHN73_30205)	-	6531481..6531702 (+)	222	Protein_5998	cation transporter	-
OHN73_RS30340 (OHN73_30220)	tig	6532321..6533718 (+)	1398	WP_266584627.1	trigger factor	-
OHN73_RS30345 (OHN73_30225)	clpP	6533999..6534619 (+)	621	WP_323178394.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHN73_RS30350 (OHN73_30230)	clpP	6534669..6535349 (+)	681	WP_323178393.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHN73_RS30355 (OHN73_30235)	clpX	6535528..6536817 (+)	1290	WP_266514322.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHN73_RS30360 (OHN73_30240)	-	6537062..6538024 (-)	963	WP_266514319.1	hypothetical protein	-
OHN73_RS30365 (OHN73_30245)	-	6538162..6540786 (+)	2625	WP_406321687.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46864.68 Da
• Isoelectric Point: 4.8160

>NTDB_id=646844 OHN73_RS30355 WP_266514322.1 6535528..6536817(+) (clpX) [Streptomyces sp. NBC_00519]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLELQSKDQFGDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVVT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=646844 OHN73_RS30355 WP_266514322.1 6535528..6536817(+) (clpX) [Streptomyces sp. NBC_00519]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCAACGGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGTGAGAACCCCTCGATCACTCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCTGGAGCTGCAGTCCAAGGACCAGTTCGGGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGTAACGCGCTGGTGAAGCAGTACCAACGTCTCTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGAGTCGTCGTCACA
GCGGACGTCGTCCACTCGAACGTGAACCCGACCCTGATCCCGCGCGACGCGCGGAACGGGCGGGGGCCGGGGGAGCAGAA
GACGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	95.804	0.517