Detailed information NTG0064675

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: H7X62_RS22295
• Genome accession: NZ_AP021935
• Coordinates: 4741962..4742987 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain WP2-W18-ESBL-10
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4736962..4747987

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
H7X62_RS22285 (WP2W18E10_43200)	rpmE	4739193..4739405 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
H7X62_RS22290 (WP2W18E10_43210)	priA	4739608..4741806 (+)	2199	WP_001550368.1	primosomal protein N'	Machinery gene
H7X62_RS22295 (WP2W18E10_43220)	cytR	4741962..4742987 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
H7X62_RS22300 (WP2W18E10_43230)	ftsN	4743079..4744038 (+)	960	WP_000068834.1	cell division protein FtsN	-
H7X62_RS22305 (WP2W18E10_43240)	hslV	4744131..4744661 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
H7X62_RS22310 (WP2W18E10_43250)	hslU	4744671..4746002 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
H7X62_RS22315 (WP2W18E10_43260)	menA	4746069..4746995 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
H7X62_RS22320 (WP2W18E10_43270)	rraA	4747088..4747573 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
H7X62_RS22325 (WP2W18E10_43280)	zapB	4747658..4747903 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=64675 H7X62_RS22295 WP_000644908.1 4741962..4742987(+) (cytR) [Escherichia coli strain WP2-W18-ESBL-10]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=64675 H7X62_RS22295 WP_000644908.1 4741962..4742987(+) (cytR) [Escherichia coli strain WP2-W18-ESBL-10]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625