Detailed information NTG0646727

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHS17_RS10910
• Genome accession: NZ_CP107836
• Coordinates: 2413597..2414895 (-)
• Length: 432 a.a.
• NCBI ID: WP_018103185.1
• Uniprot ID: A0ABY6PWL5
• Organism: Streptomyces sp. NBC_00523
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2408597..2419895

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHS17_RS10900 (OHS17_10915)	-	2409761..2412382 (-)	2622	WP_330311994.1	valine--tRNA ligase	-
OHS17_RS10905 (OHS17_10920)	-	2412522..2413517 (+)	996	WP_330311995.1	hypothetical protein	-
OHS17_RS10910 (OHS17_10925)	clpX	2413597..2414895 (-)	1299	WP_018103185.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHS17_RS10915 (OHS17_10930)	clpP	2415052..2415735 (-)	684	WP_018518168.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHS17_RS10920 (OHS17_10935)	-	2415814..2416419 (-)	606	WP_018103183.1	ATP-dependent Clp protease proteolytic subunit	-
OHS17_RS10925 (OHS17_10940)	tig	2416686..2418071 (-)	1386	WP_330311996.1	trigger factor	-
OHS17_RS10940 (OHS17_10955)	-	2418587..2418781 (-)	195	WP_018103181.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47332.15 Da
• Isoelectric Point: 4.8363

>NTDB_id=646727 OHS17_RS10910 WP_018103185.1 2413597..2414895(-) (clpX) [Streptomyces sp. NBC_00523]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDEGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=646727 OHS17_RS10910 WP_018103185.1 2413597..2414895(-) (clpX) [Streptomyces sp. NBC_00523]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAAGAGCTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGGCGCGGGCCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCTCTGCTCCAGATCCTCATCGAGCCGCGCAACGCTCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACC
GCCGACGTGGTCCGCAACAACGTCAACCCGACCCTGGTCCCGCGCGAACCGCGCACGATCGGCAAGGGCGACGAGGGCCG
CCACGAGAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516