Detailed information NTG0646688

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: L1F30_RS14330
• Genome accession: NZ_CP090959
• Coordinates: 3276370..3277710 (+)
• Length: 446 a.a.
• NCBI ID: WP_253357098.1
• Uniprot ID: -
• Organism: Simiduia sp. 21SJ11W-1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3271370..3282710

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1F30_RS14315 (L1F30_14315)	pssA	3272041..3272934 (-)	894	WP_253357085.1	CDP-diacylglycerol--serine O-phosphatidyltransferase	-
L1F30_RS14320 (L1F30_14320)	-	3272984..3274615 (-)	1632	WP_253357087.1	NAD+ synthase	-
L1F30_RS14325 (L1F30_14325)	-	3274727..3276370 (+)	1644	WP_253357096.1	PAS domain-containing sensor histidine kinase	-
L1F30_RS14330 (L1F30_14330)	pilR	3276370..3277710 (+)	1341	WP_253357098.1	sigma-54 dependent transcriptional regulator	Regulator
L1F30_RS14335 (L1F30_14335)	-	3277810..3278364 (+)	555	WP_253357100.1	GspH/FimT family protein	-
L1F30_RS14340 (L1F30_14340)	-	3278377..3278877 (-)	501	WP_305879911.1	type IV pilin protein	-
L1F30_RS14350 (L1F30_14350)	-	3278870..3282184 (-)	3315	WP_253357118.1	pilus assembly protein	-

Sequence

Protein

• Length: 446 a.a.
• Molecular weight: 49047.07 Da
• Isoelectric Point: 5.6549

>NTDB_id=646688 L1F30_RS14330 WP_253357098.1 3276370..3277710(+) (pilR) [Simiduia sp. 21SJ11W-1]
MGGHALIVDDEPDILELLNITLARMGVQCDTAETVAHARTLIESEKRYDICLTDMRLPDGNGIELVKLIQAQCPDTPVAM
ITAHGNIDTAIESMKAGAFDFLSKPIDIERLRTLVATAIKVTTAEAVPDNALLVGNTAAMQQLKEKIFKLSRSQAPVLIT
GESGSGKELIARSIHLQGPRSDSPFVAVNCGAIPRELMESEFFGHKKGSFTGAATDKSGLFQAAENGTLFLDEVADLPMD
MQVKLLRAIQEKAVRPIGGQQELPTNVRILSATHKDLREEIKRGNFRQDLYYRINVIELTAPALRDRQQDIPVLTHAILA
NLANEYGTPPAQLAPSALKALHDYSFPGNVRELENILERAYTLCDSNTIQASDLQLQQASTAASTPKPGRHEALHGQPLD
EHLEEIEKDLIVNALDETKWNRTEAAKRLGISFRSLRYRLKKLGLE

Nucleotide

• Length: 1341 bp

>NTDB_id=646688 L1F30_RS14330 WP_253357098.1 3276370..3277710(+) (pilR) [Simiduia sp. 21SJ11W-1]
ATGGGCGGCCATGCACTCATCGTCGATGACGAACCCGATATTTTAGAGCTGTTAAATATCACCCTCGCACGCATGGGCGT
GCAATGCGATACCGCCGAAACGGTGGCACACGCACGCACTCTGATTGAGAGCGAAAAGCGCTACGATATCTGCCTGACCG
ATATGCGCCTGCCAGACGGCAATGGCATTGAACTGGTGAAACTTATTCAAGCCCAGTGCCCGGATACCCCCGTGGCCATG
ATTACGGCACACGGCAATATTGATACTGCCATTGAATCCATGAAAGCCGGCGCTTTCGACTTTTTATCCAAACCCATCGA
CATTGAACGGCTACGCACGCTGGTGGCAACCGCCATAAAAGTAACCACTGCAGAAGCGGTGCCCGACAACGCACTGCTGG
TGGGAAATACTGCAGCAATGCAGCAACTGAAAGAGAAAATATTCAAATTATCGCGCAGCCAGGCGCCGGTGCTGATCACC
GGGGAGTCCGGCTCTGGCAAGGAGCTGATAGCCCGCTCAATCCACTTGCAAGGCCCGCGTAGCGACTCACCCTTCGTTGC
GGTGAACTGCGGCGCCATTCCGCGAGAATTGATGGAAAGCGAGTTTTTTGGCCATAAAAAAGGCAGCTTCACGGGTGCAG
CCACCGATAAATCCGGCTTATTTCAGGCCGCCGAAAACGGCACCCTATTTCTCGATGAAGTGGCAGACCTGCCCATGGAC
ATGCAAGTAAAACTGCTGCGTGCCATTCAGGAGAAAGCTGTACGCCCCATTGGCGGCCAGCAAGAGCTGCCTACCAACGT
GCGCATTCTTAGCGCCACCCATAAAGATCTGCGCGAAGAAATCAAGCGCGGCAATTTCCGCCAGGATTTGTACTACCGCA
TTAACGTTATTGAACTGACTGCACCCGCGCTGCGCGACAGGCAGCAAGACATCCCCGTGCTCACCCACGCCATTCTTGCA
AACCTGGCCAATGAATATGGCACGCCACCGGCGCAACTGGCACCCTCTGCTTTAAAGGCACTGCATGATTACAGCTTTCC
TGGCAACGTGCGAGAGCTTGAGAATATTTTAGAGCGGGCTTACACCCTGTGCGACAGCAATACCATTCAAGCATCAGACT
TGCAGCTTCAACAGGCATCAACTGCAGCCAGCACGCCCAAACCCGGCCGTCACGAAGCGCTGCACGGCCAGCCGCTCGAT
GAACACCTGGAAGAAATTGAAAAAGATCTTATTGTTAATGCACTGGATGAAACCAAGTGGAACCGCACCGAGGCCGCCAA
GCGCTTAGGCATAAGTTTTAGATCCCTTCGCTACCGGCTAAAAAAGCTGGGCCTTGAGTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (133-299)

• Response regulator receiver domain (Response_reg) (6-115)

• Bacterial regulatory protein, Fis family (HTH_8) (403-443)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	62.387	99.552	0.621
pilR	Acinetobacter baumannii strain A118	48.696	100	0.502