Detailed information    

insolico Bioinformatically predicted

Overview

Name   braS   Type   Regulator
Locus tag   LZT96_RS01230 Genome accession   NZ_CP090941
Coordinates   299529..300425 (+) Length   298 a.a.
NCBI ID   WP_002437988.1    Uniprot ID   A0A4Q9W434
Organism   Staphylococcus epidermidis strain HAF242     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 294529..305425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZT96_RS01210 (LZT96_01210) - 295214..296758 (+) 1545 WP_002497778.1 NAD(P)H-binding protein -
  LZT96_RS01215 (LZT96_01215) - 296881..298350 (-) 1470 WP_001830638.1 alkaline phosphatase -
  LZT96_RS01220 (LZT96_01220) - 298648..298827 (+) 180 WP_001830653.1 hypothetical protein -
  LZT96_RS01225 (LZT96_01225) braR 298858..299523 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  LZT96_RS01230 (LZT96_01230) braS 299529..300425 (+) 897 WP_002437988.1 HAMP domain-containing sensor histidine kinase Regulator
  LZT96_RS01235 (LZT96_01235) - 300536..301285 (+) 750 WP_002497777.1 ABC transporter ATP-binding protein -
  LZT96_RS01240 (LZT96_01240) - 301287..303299 (+) 2013 WP_002477185.1 ABC transporter permease -
  LZT96_RS01245 (LZT96_01245) - 303403..303993 (+) 591 WP_002497776.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 298 a.a.        Molecular weight: 34882.57 Da        Isoelectric Point: 7.2750

>NTDB_id=646567 LZT96_RS01230 WP_002437988.1 299529..300425(+) (braS) [Staphylococcus epidermidis strain HAF242]
MKFAYIQSIRNEISIILIILLFFALIFYVFSLPFDAYVLAISIILLLMCVRWWIKYLSFKKNEHLKDKVAYLEHELAHVK
NQQIEYRNDVESYFLTWVHQIKTPITASQLLLERNEENVVNRVRQEIVHIDNYTSLALSYLKLLNEESDMTITKVTVDDL
IRPLLLKYRIQFIEQKTQIHYKKSEDIILTDAQWASIMIEQLLNNALKYAKGKDIWIDFDVANQTLQIKDNGIGISKADI
PKIFDKGYSGFNGRLNEQSTGIGLFIVQHIANHLNIQVTVQSELNHGTVFFIHFTKEK

Nucleotide


Download         Length: 897 bp        

>NTDB_id=646567 LZT96_RS01230 WP_002437988.1 299529..300425(+) (braS) [Staphylococcus epidermidis strain HAF242]
ATGAAGTTTGCATATATTCAATCGATTCGTAATGAGATTTCAATTATTTTAATAATTCTATTATTTTTTGCACTTATATT
TTATGTGTTTTCTTTACCTTTTGATGCATACGTACTTGCAATCAGTATAATATTACTATTGATGTGTGTACGTTGGTGGA
TAAAGTATTTAAGTTTTAAAAAGAACGAACATCTTAAAGATAAAGTAGCATATTTAGAACATGAGTTAGCACATGTTAAG
AATCAGCAAATTGAATATCGTAACGATGTTGAAAGTTATTTTTTAACATGGGTACATCAAATTAAAACACCTATCACTGC
CTCACAATTACTTTTGGAGAGAAACGAGGAGAATGTAGTTAATCGTGTTAGACAAGAAATTGTGCACATTGATAATTATA
CAAGTCTCGCATTAAGTTATTTAAAATTATTAAATGAAGAGTCAGATATGACAATTACCAAAGTGACAGTTGATGATTTG
ATTCGCCCGTTGCTTTTAAAATATAGAATTCAGTTTATTGAGCAAAAGACGCAAATCCATTATAAAAAAAGTGAGGACAT
TATTTTAACCGATGCACAATGGGCGTCTATAATGATAGAGCAACTTTTAAATAATGCTTTAAAATATGCTAAAGGTAAAG
ATATTTGGATAGATTTTGATGTTGCCAATCAAACTCTACAGATTAAAGATAATGGTATTGGGATTAGTAAAGCAGATATT
CCTAAAATTTTTGATAAAGGATACTCAGGATTTAACGGTAGATTGAATGAACAATCAACTGGTATAGGTTTATTTATAGT
GCAACACATTGCAAATCATTTAAATATACAAGTAACTGTACAATCAGAATTGAATCATGGGACAGTATTTTTTATACATT
TTACTAAAGAAAAATAA

Domains

Predicted by InterproScan.

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(197-296)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Q9W434

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braS Staphylococcus aureus N315

59.661

98.993

0.591