Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   LZT96_RS01225 Genome accession   NZ_CP090941
Coordinates   298858..299523 (+) Length   221 a.a.
NCBI ID   WP_001830679.1    Uniprot ID   A0A2G7HYS8
Organism   Staphylococcus epidermidis strain HAF242     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 293858..304523
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LZT96_RS01210 (LZT96_01210) - 295214..296758 (+) 1545 WP_002497778.1 NAD(P)H-binding protein -
  LZT96_RS01215 (LZT96_01215) - 296881..298350 (-) 1470 WP_001830638.1 alkaline phosphatase -
  LZT96_RS01220 (LZT96_01220) - 298648..298827 (+) 180 WP_001830653.1 hypothetical protein -
  LZT96_RS01225 (LZT96_01225) braR 298858..299523 (+) 666 WP_001830679.1 response regulator transcription factor Regulator
  LZT96_RS01230 (LZT96_01230) braS 299529..300425 (+) 897 WP_002437988.1 HAMP domain-containing sensor histidine kinase Regulator
  LZT96_RS01235 (LZT96_01235) - 300536..301285 (+) 750 WP_002497777.1 ABC transporter ATP-binding protein -
  LZT96_RS01240 (LZT96_01240) - 301287..303299 (+) 2013 WP_002477185.1 ABC transporter permease -
  LZT96_RS01245 (LZT96_01245) - 303403..303993 (+) 591 WP_002497776.1 DUF4064 domain-containing protein -

Sequence

Protein


Download         Length: 221 a.a.        Molecular weight: 25629.71 Da        Isoelectric Point: 5.0250

>NTDB_id=646566 LZT96_RS01225 WP_001830679.1 298858..299523(+) (braR) [Staphylococcus epidermidis strain HAF242]
MKIFIVEDDLVIAESLANELSKWNYEVHVVDNFEKIMEDFRRVEPQLVLLDINLPTLNGFHWCQEMRKVSHVPIMFISSR
TDNMDQILAIQMGGDDFIEKPFNLSLTVAKIQALLRRTYDLSIARDEIAVKGCKLIVDEAKLSKDNEHVQLSLTELQILK
LLFQNENKYVSRTALIEKCWESENFIDDNTLAVNMTRLRKKLLSIGVDDLIETKKNVGYRV

Nucleotide


Download         Length: 666 bp        

>NTDB_id=646566 LZT96_RS01225 WP_001830679.1 298858..299523(+) (braR) [Staphylococcus epidermidis strain HAF242]
ATGAAAATTTTCATTGTAGAAGACGATTTAGTGATTGCTGAAAGTTTAGCTAATGAGCTATCTAAATGGAATTATGAGGT
GCATGTGGTTGATAATTTTGAAAAGATAATGGAAGATTTTCGCCGAGTAGAACCACAACTCGTATTATTAGATATCAATC
TACCAACACTTAATGGCTTCCATTGGTGCCAAGAAATGCGAAAAGTATCTCATGTGCCTATTATGTTTATTAGTTCAAGA
ACAGATAATATGGATCAAATTCTGGCTATCCAAATGGGTGGCGATGATTTTATCGAGAAACCATTTAACTTGTCTTTAAC
AGTAGCTAAAATTCAGGCACTATTGCGTCGCACTTATGATTTATCAATAGCTCGTGATGAAATAGCTGTTAAAGGTTGTA
AACTAATTGTTGATGAGGCCAAGCTTAGCAAGGATAATGAACATGTTCAACTTTCCTTAACAGAGCTACAGATATTAAAA
TTGTTATTTCAAAATGAAAATAAATATGTAAGTCGTACAGCTTTAATTGAGAAGTGTTGGGAGTCTGAGAATTTTATTGA
TGACAATACGCTCGCAGTAAATATGACACGATTACGAAAAAAATTACTTTCTATCGGTGTCGATGATTTAATTGAGACAA
AGAAAAATGTAGGATATAGGGTTTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-111)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(147-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2G7HYS8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

79.186

100

0.792