Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG861_RS17835 Genome accession   NZ_CP107811
Coordinates   3960060..3961184 (-) Length   374 a.a.
NCBI ID   WP_329196133.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00539     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3955060..3966184
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG861_RS17810 (OG861_17815) cseB 3955814..3956524 (-) 711 WP_329196138.1 two-component system response regulator CseB -
  OG861_RS17815 (OG861_17820) - 3956538..3957179 (-) 642 WP_329202286.1 hypothetical protein -
  OG861_RS17820 (OG861_17825) - 3957224..3957784 (-) 561 WP_329196137.1 SigE family RNA polymerase sigma factor -
  OG861_RS17825 (OG861_17830) - 3958072..3958977 (-) 906 WP_329196136.1 A/G-specific adenine glycosylase -
  OG861_RS17830 (OG861_17835) - 3959310..3960041 (+) 732 WP_329196135.1 hypothetical protein -
  OG861_RS17835 (OG861_17840) disA 3960060..3961184 (-) 1125 WP_329196133.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG861_RS17840 (OG861_17845) radA/sms 3961401..3962813 (-) 1413 WP_329196131.1 DNA repair protein RadA Machinery gene
  OG861_RS17845 (OG861_17850) - 3963021..3964769 (+) 1749 WP_329196129.1 hypothetical protein -
  OG861_RS17850 (OG861_17855) - 3964831..3965628 (-) 798 WP_329196127.1 hypothetical protein -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40376.34 Da        Isoelectric Point: 5.0260

>NTDB_id=646531 OG861_RS17835 WP_329196133.1 3960060..3961184(-) (disA) [Streptomyces sp. NBC_00539]
MAAKDGAAASGKSGASSRQEAMMRASLSAVAPGQPLRDGLERIVRGNTGGLIVLGMDKSVEAMCTGGFVLDVEFTATRLR
ELCKLDGALILDKDLTKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCGFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVEEALPALDALTHPELLELGIVARALGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646531 OG861_RS17835 WP_329196133.1 3960060..3961184(-) (disA) [Streptomyces sp. NBC_00539]
GTGGCAGCCAAGGACGGTGCAGCAGCATCCGGGAAGTCGGGCGCGAGCTCCAGGCAGGAAGCCATGATGCGGGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCCCCTGCGCGACGGTCTCGAACGGATCGTCCGCGGCAACACCGGCGGCCTGATCGTCC
TCGGGATGGACAAGTCCGTCGAGGCGATGTGCACGGGCGGTTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGCCCTCATCCTCGACAAGGACCTCACCAAGATCCTCCGGGCGGGCGTGCAGCTGGTCCC
GGACGCGTCGATCCCGACGGAGGAGACCGGCACCCGGCACCGCACGGCGGACCGGGTCTCGAAGCAGTGCGGGTTCCCCG
TCGTGTCCGTGTCGCAGTCGATGCGGCTGATCGCGCTCTACGTGGACGGGGAGCGGCGGGTCCTGGAGGAGTCCGGGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGCCTGGACGAGGTCGCGGGAACGCTGTC
GGCGCTGGAGATCGAGGACCTGGTCACGGTGCGCGACGTGACGGCGGTCGCGCAGCGGCTGGAAATGGTTCGCCGTATTG
CCACGGAAATCGCCGAATACGTGGTGGAACTCGGCACCGACGGACGCCTCCTGTCGCTCCAGCTGGACGAGCTGACGGTC
GGGATCGAGCAGGAACGGGAGCTGGTGATCCGGGACTACGTTCCGGAGCCGACGGCGAAGCGTTCCCGCACGGTGGAGGA
GGCGCTGCCGGCGCTGGACGCGCTGACGCACCCGGAGCTGCTGGAGCTGGGGATCGTCGCGAGGGCCCTCGGGTACACGG
GCTCGCCTGAGACGCTGGATTCGGCGGTCTCGCCGCGCGGGTACCGGCTCCTGGCCAAGGTGCCCCGGCTGCCGGGGGCG
ATCATCGAGCGGCTGGTCGAGCACTTCGGGGGCCTGCAGAAGCTGCTGGCCGCGAGCGTGGACGACCTCCAGACCGTGGA
CGGCGTGGGCGAGGCCCGCGCGCGCAGCGTCCGCGAGGGCCTGTCCCGCCTGGCCGAGTCCTCGATCCTCGAACGCTACG
TGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438