Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG266_RS19315 Genome accession   NZ_CP107799
Coordinates   4439508..4440632 (+) Length   374 a.a.
NCBI ID   WP_266830670.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00554 strain NBC 00554     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 4434508..4445632
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG266_RS19300 (OG266_19300) - 4435075..4435914 (+) 840 WP_371547273.1 hypothetical protein -
  OG266_RS19305 (OG266_19305) - 4435948..4437819 (-) 1872 WP_371547276.1 hypothetical protein -
  OG266_RS19310 (OG266_19310) radA/sms 4438027..4439436 (+) 1410 WP_371547279.1 DNA repair protein RadA Machinery gene
  OG266_RS19315 (OG266_19315) disA 4439508..4440632 (+) 1125 WP_266830670.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG266_RS19320 (OG266_19320) - 4440728..4441555 (-) 828 WP_329546254.1 hypothetical protein -
  OG266_RS19325 (OG266_19325) - 4441957..4442871 (+) 915 WP_371547281.1 A/G-specific adenine glycosylase -
  OG266_RS19330 (OG266_19330) - 4443160..4443711 (+) 552 WP_266456951.1 SigE family RNA polymerase sigma factor -
  OG266_RS19335 (OG266_19335) - 4443804..4444442 (+) 639 WP_371552867.1 hypothetical protein -
  OG266_RS19340 (OG266_19340) cseB 4444467..4445183 (+) 717 WP_329546256.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40147.92 Da        Isoelectric Point: 5.0095

>NTDB_id=646434 OG266_RS19315 WP_266830670.1 4439508..4440632(+) (disA) [Streptomyces sp. NBC_00554 strain NBC 00554]
MAANDRAAAPGKSGGSSGADGLMRAALSAVAPGTALRDGLERILRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVIDKDITKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVDFTVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLDELIA
GVEPERELVVRDYVPEPTAKRSRTVDEALSELHALTHAELLELPTVARALGYTGSPEALDSAVSPRGYRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646434 OG266_RS19315 WP_266830670.1 4439508..4440632(+) (disA) [Streptomyces sp. NBC_00554 strain NBC 00554]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAGTCCGGTGGGAGCTCCGGTGCCGATGGCCTGATGCGCGCCGCACT
GAGCGCCGTGGCACCCGGCACGGCCCTGCGCGACGGGCTCGAGCGGATCCTCCGCGGCAACACCGGAGGACTCATCGTGC
TCGGGTCCGACAAGACCGTCGAGGCGATGTGTACCGGCGGCTTCGTGCTGGACGTCGAGTTCACCGCGACACGGCTGCGC
GAGCTGTGCAAGCTCGACGGCGGCATCGTGATCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTGCAGCTGGTGCC
CGACCCGACCATCCCGACGGAGGAGACCGGCACCCGGCACCGCACCGCGGACCGGGTGAGCAAGCAGGTCGACTTCACGG
TCGTCTCGGTCTCCCAGTCGATGCGCCTGATCGCCCTCTACGTGGACGGCCAGCGCCGCGTCCTCGAAGACTCCGCCGCG
ATCCTCTCCCGCGCCAACCAGGCCCTGGCGACCCTGGAGCGCTACAAACTCCGCCTCGACGAGGTCGCGGGCACCCTGTC
GGCCCTCGAGATCGAGGACCTGGTCACGGTCCGCGATGTCTCGGCGGTGGCCCAGCGGCTGGAGATGGTGCGCCGGATCG
CCACCGAGATCGCCGAGTACGTGGTGGAGCTCGGCACCGACGGGCGCCTTCTCGCGCTCCAGCTCGACGAGTTGATCGCC
GGCGTCGAACCCGAGCGTGAACTCGTCGTACGGGACTACGTGCCCGAGCCGACCGCCAAGCGCTCCCGCACGGTCGACGA
GGCGCTCTCCGAGCTCCACGCGCTCACCCACGCCGAGCTGCTCGAACTCCCCACGGTGGCACGGGCGTTGGGCTACACCG
GCTCCCCCGAGGCGCTGGACTCCGCCGTCTCCCCGCGCGGCTACCGCCTCCTCGCCAAGGTGCCCCGCCTGCCCGGCGCG
ATCATCGACCGCCTCGTGGAGCACTTCGGGGGCCTGCAGAAGCTCCTCGCCGCCAGCGTCGACGACCTCCAGACGGTCGA
CGGCGTGGGCGAGGCGCGGGCGCGCAGCGTCCGTGAGGGTCTGTCGCGGCTGGCGGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

44.875

96.524

0.433