Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OG956_RS15500 Genome accession   NZ_CP107796
Coordinates   3632326..3633450 (+) Length   374 a.a.
NCBI ID   WP_330338559.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00557     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3627326..3638450
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OG956_RS15485 (OG956_15470) - 3627882..3628715 (+) 834 WP_330338556.1 hypothetical protein -
  OG956_RS15490 (OG956_15475) - 3628886..3630637 (-) 1752 WP_330338557.1 hypothetical protein -
  OG956_RS15495 (OG956_15480) radA/sms 3630835..3632244 (+) 1410 WP_330338558.1 DNA repair protein RadA Machinery gene
  OG956_RS15500 (OG956_15485) disA 3632326..3633450 (+) 1125 WP_330338559.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OG956_RS15505 (OG956_15490) - 3633492..3634310 (-) 819 WP_330342849.1 hypothetical protein -
  OG956_RS15510 (OG956_15495) - 3634491..3635366 (+) 876 WP_330338560.1 A/G-specific adenine glycosylase -
  OG956_RS15515 (OG956_15500) - 3635643..3636182 (+) 540 WP_330338561.1 SigE family RNA polymerase sigma factor -
  OG956_RS15520 (OG956_15505) - 3636170..3636820 (+) 651 WP_330338562.1 hypothetical protein -
  OG956_RS15525 (OG956_15510) cseB 3636855..3637559 (+) 705 WP_330338563.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 39996.75 Da        Isoelectric Point: 4.9235

>NTDB_id=646345 OG956_RS15500 WP_330338559.1 3632326..3633450(+) (disA) [Streptomyces sp. NBC_00557]
MAANDRAAAPGKIGGSAGSDGLMRASLSAVAPGTALRDGLERVLRGNTGGLIVLGSDKTVEAMCTGGFVLDVEFTATRLR
ELCKLDGGIVLSSDLSKILRAGVQLVPDPTIPTEETGTRHRTADRVSKQVGFPVVSVSQSMRLIALYVDGQRRVLEDSAA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVSAVAQRLEMVRRIATEIAEYVVELGTDGRLLALQLEELIA
GVEPDRELVVRDYVPEPTAKRSRTVEEALSELDALTHAELIELGTVARALGYTGSPETLDSAVSPRGFRLLAKVPRLPGA
IIDRLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646345 OG956_RS15500 WP_330338559.1 3632326..3633450(+) (disA) [Streptomyces sp. NBC_00557]
GTGGCAGCCAACGACCGGGCAGCAGCTCCCGGAAAAATCGGTGGGAGTGCCGGTTCCGATGGCCTGATGCGTGCCTCGCT
GAGCGCCGTGGCTCCTGGTACGGCCCTGCGGGACGGCTTGGAGCGCGTGCTGCGCGGCAACACCGGCGGGCTGATCGTCC
TCGGCTCCGACAAGACGGTCGAGGCGATGTGCACGGGCGGGTTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGG
GAGCTGTGCAAGCTGGACGGCGGCATCGTGCTGTCGTCGGACCTGTCGAAGATCCTGCGGGCCGGTGTCCAGCTGGTTCC
GGACCCGACGATCCCCACGGAGGAGACGGGCACCCGGCACCGTACGGCGGACCGGGTGAGCAAGCAGGTCGGCTTCCCGG
TGGTCTCGGTGTCCCAGTCGATGCGCCTGATCGCCCTGTACGTCGACGGTCAGCGCCGCGTCCTGGAGGACTCGGCGGCG
ATCCTGTCCCGCGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTGGACGAGGTGGCCGGCACCCTCTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTGCGGGACGTGTCCGCCGTCGCGCAGCGCCTGGAGATGGTCCGCCGCATCG
CCACCGAAATCGCCGAGTACGTGGTCGAGCTGGGCACCGACGGGCGTCTTCTCGCGCTCCAGCTCGAGGAGTTGATCGCC
GGTGTCGAGCCGGACCGCGAGCTGGTCGTCCGGGACTACGTCCCCGAGCCGACGGCCAAGCGCTCCCGCACGGTCGAGGA
GGCCCTGTCCGAGCTGGACGCGCTGACCCACGCGGAGCTGATCGAACTCGGCACGGTGGCACGGGCGCTGGGCTACACCG
GCTCCCCCGAGACGCTCGACTCCGCGGTCTCCCCGCGGGGCTTCAGGCTGCTGGCCAAGGTTCCGCGGCTTCCCGGCGCG
ATCATCGACCGGCTGGTGGAGCACTTCGGCGGCCTGCAGAAGCTGCTCGCCGCGAGTGTGGACGACCTGCAGACGGTGGA
CGGCGTGGGCGAGGCGCGGGCCAGGAGCGTGCGGGAAGGTCTGTCGCGTCTGGCCGAGTCGTCGATCCTGGAGCGGTACG
TCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

46.243

92.513

0.428