Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   L0961_RS05635 Genome accession   NZ_CP090905
Coordinates   1087795..1087986 (+) Length   63 a.a.
NCBI ID   WP_057080097.1    Uniprot ID   -
Organism   Bacillus velezensis strain Yao     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1082795..1092986
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0961_RS05605 (L0961_05605) argF 1083648..1084619 (+) 972 WP_015388451.1 ornithine carbamoyltransferase -
  L0961_RS05610 (L0961_05610) - 1084695..1084874 (+) 180 WP_003155070.1 YjzC family protein -
  L0961_RS05615 (L0961_05615) - 1084910..1085095 (-) 186 WP_003155069.1 YjzD family protein -
  L0961_RS05620 (L0961_05620) - 1085356..1086090 (+) 735 WP_014304780.1 hypothetical protein -
  L0961_RS05625 (L0961_05625) - 1086173..1086739 (+) 567 WP_143255789.1 hypothetical protein -
  L0961_RS05630 (L0961_05630) med 1086829..1087782 (+) 954 WP_234949632.1 BMP family ABC transporter substrate-binding protein Regulator
  L0961_RS05635 (L0961_05635) comZ 1087795..1087986 (+) 192 WP_057080097.1 ComZ family protein Regulator
  L0961_RS05640 (L0961_05640) - 1088016..1088234 (-) 219 WP_003155059.1 hypothetical protein -
  L0961_RS05645 (L0961_05645) - 1088402..1089340 (+) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  L0961_RS05650 (L0961_05650) fabF 1089363..1090601 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  L0961_RS05655 (L0961_05655) - 1090685..1091470 (+) 786 WP_003155055.1 DUF2268 domain-containing protein -
  L0961_RS05660 (L0961_05660) - 1091644..1092630 (+) 987 WP_003155054.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7215.38 Da        Isoelectric Point: 4.2259

>NTDB_id=646291 L0961_RS05635 WP_057080097.1 1087795..1087986(+) (comZ) [Bacillus velezensis strain Yao]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFISVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=646291 L0961_RS05635 WP_057080097.1 1087795..1087986(+) (comZ) [Bacillus velezensis strain Yao]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTATATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

84.483

92.063

0.778