Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   L0961_RS05630 Genome accession   NZ_CP090905
Coordinates   1086829..1087782 (+) Length   317 a.a.
NCBI ID   WP_234949632.1    Uniprot ID   -
Organism   Bacillus velezensis strain Yao     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1081829..1092782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0961_RS05605 (L0961_05605) argF 1083648..1084619 (+) 972 WP_015388451.1 ornithine carbamoyltransferase -
  L0961_RS05610 (L0961_05610) - 1084695..1084874 (+) 180 WP_003155070.1 YjzC family protein -
  L0961_RS05615 (L0961_05615) - 1084910..1085095 (-) 186 WP_003155069.1 YjzD family protein -
  L0961_RS05620 (L0961_05620) - 1085356..1086090 (+) 735 WP_014304780.1 hypothetical protein -
  L0961_RS05625 (L0961_05625) - 1086173..1086739 (+) 567 WP_143255789.1 hypothetical protein -
  L0961_RS05630 (L0961_05630) med 1086829..1087782 (+) 954 WP_234949632.1 BMP family ABC transporter substrate-binding protein Regulator
  L0961_RS05635 (L0961_05635) comZ 1087795..1087986 (+) 192 WP_057080097.1 ComZ family protein Regulator
  L0961_RS05640 (L0961_05640) - 1088016..1088234 (-) 219 WP_003155059.1 hypothetical protein -
  L0961_RS05645 (L0961_05645) - 1088402..1089340 (+) 939 WP_003155057.1 beta-ketoacyl-ACP synthase III -
  L0961_RS05650 (L0961_05650) fabF 1089363..1090601 (+) 1239 WP_003155056.1 beta-ketoacyl-ACP synthase II -
  L0961_RS05655 (L0961_05655) - 1090685..1091470 (+) 786 WP_003155055.1 DUF2268 domain-containing protein -
  L0961_RS05660 (L0961_05660) - 1091644..1092630 (+) 987 WP_003155054.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35358.94 Da        Isoelectric Point: 4.5594

>NTDB_id=646290 L0961_RS05630 WP_234949632.1 1086829..1087782(+) (med) [Bacillus velezensis strain Yao]
MITRLVMIFSVLLLLSGCTQTPFKGKIEKVGMLFPDTISDLVWGTKGYKGLLAIQSEFNVDVYYKENIRSDEDILKAIDD
FHKKGVNLLYGHGNEYEEIFNMISKDYPDMEFVVANGTAKSDNVTSVHLMGEAMGFFGGMTAAHMSKNNEVGVIASFLWQ
PEVDGFIKGAKYEKPDITVNTEFTDHWDNGNEALHLYEKLKAEGTDVVYPAGDGYNVPVIQQIKKDGLYAIGYVAEQSNL
GKNTVLTSTVQNVDKAYTLIAEQYNKGTLKSGDHDFDFREGVVEMGTFSPLVDKAFQDKISDLVKTYNQTNELPSNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=646290 L0961_RS05630 WP_234949632.1 1086829..1087782(+) (med) [Bacillus velezensis strain Yao]
TTGATCACCAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGCGGATGCACACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGAATGCTTTTCCCCGATACCATCAGTGACTTGGTATGGGGCACAAAAGGTTACAAAGGTTTATTAGCGA
TACAATCTGAATTTAACGTTGACGTTTATTATAAAGAAAATATCAGATCCGATGAAGATATTTTAAAAGCGATAGATGAT
TTTCATAAAAAAGGAGTCAATCTTTTATACGGGCACGGAAATGAATACGAGGAAATCTTCAATATGATCAGCAAGGATTA
TCCCGACATGGAATTCGTCGTCGCAAACGGAACGGCGAAAAGCGATAATGTCACAAGCGTTCACCTTATGGGAGAAGCAA
TGGGTTTTTTCGGGGGAATGACGGCCGCCCATATGTCAAAAAACAATGAGGTCGGTGTCATCGCCTCTTTTCTGTGGCAG
CCTGAAGTAGACGGCTTTATCAAAGGGGCGAAATATGAAAAGCCTGATATCACCGTCAATACTGAATTTACGGACCACTG
GGATAACGGCAATGAAGCGCTGCATCTTTACGAGAAGTTAAAAGCGGAAGGCACGGATGTTGTATATCCGGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGGCTTTACGCCATCGGCTATGTCGCCGAGCAATCGAATCTC
GGCAAAAACACGGTGCTGACAAGCACGGTGCAAAACGTAGATAAAGCCTATACATTAATTGCCGAGCAATATAATAAAGG
TACGCTCAAGAGCGGAGATCACGACTTTGATTTCAGGGAAGGAGTCGTTGAAATGGGGACGTTCAGCCCGCTGGTGGACA
AAGCGTTTCAAGACAAAATCTCAGACCTTGTCAAAACGTATAATCAAACAAATGAACTGCCGTCAAATGAATAG

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

78.233

100

0.782